[ome-users] 4.4.4 release of Bio-Formats

Melissa Linkert melissa at glencoesoftware.com
Tue Sep 25 18:16:12 BST 2012


Hi Michael,

> Yesterday's release does not show us the full resolution Leica SCN dataset.  We still see only the low magnification versions and a few of the slices are all black.

Please do note that the ticket we filed for your Leica SCN datasets has not
been closed, which means that the problem is known to be not yet fixed:

http://trac.openmicroscopy.org.uk/ome/ticket/9628

Regards,
-Melissa

On Tue, Sep 25, 2012 at 05:00:15PM +0000, Cammer, Michael wrote:
> Dear Melissa,
> 
> Yesterday's release does not show us the full resolution Leica SCN dataset.  We still see only the low magnification versions and a few of the slices are all black.
> 
> Regards,
> 
> Michael
> 
> -----Original Message-----
> From: ome-users-bounces at lists.openmicroscopy.org.uk [mailto:ome-users-bounces at lists.openmicroscopy.org.uk] On Behalf Of Melissa Linkert
> Sent: Tuesday, September 25, 2012 12:11 PM
> To: ome-users at lists.openmicroscopy.org.uk; ome-devel at lists.openmicroscopy.org.uk; imagej at list.nih.gov; confocalmicroscopy at lists.umn.edu; scijava at googlegroups.com
> Subject: [ome-users] 4.4.4 release of Bio-Formats
> 
> Hello everyone,
> 
> Today, the OME Consortium (http://openmicroscopy.org/) is pleased to announce the 4.4.4 release of Bio-Formats (http://loci.wisc.edu/bio-formats).
> 
> This release contains the following notable changes:
> 
> * Many, many bug fixes (especially in Nikon .nd2 and Metamorph support)
> * Support for Zeiss AxioVision TIFF datasets
> * Support for Leica SCN datasets
> * API support for large image "pyramids"
> * Improved documentation
> * Improvements to automated regression testing
> * Smarter channel colorization in the Bio-Formats ImageJ plugin
> 
> You can download Bio-Formats here:
> 
> http://loci.wisc.edu/bio-formats/downloads
> 
> As usual, we are now working towards the next release (4.5.0). Items which may be included in the next release are listed on this roadmap:
> 
> http://trac.openmicroscopy.org/ome/query?group=status&component=Bio-Formats&milestone=OMERO-4.5
> 
> We are, as always, very grateful for the bug reports, test files, and patches submitted by the community. If you have any questions or comments, or if you have found a bug, please contact us as instructed here:
> 
> http://www.openmicroscopy.org/site/community/mailing-lists
> 
> Kind regards,
> 
> Melissa Linkert
> Glencoe Software, Inc.
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