[ome-users] Matlab JPEG2000 comments

[Mario Emmenlauer]

Dear Melissa,

with the daily builds up until now , I can not read the Matlab JPEG2000
comments (yet). Is the patch already in?

Thanks and all the best,

     Mario



On 08/28/2012 08:39 AM, Mario Emmenlauer wrote:
>
> Dear Melissa,
>
> thanks a lot for the very very quick and helpful response!
> I'll test the development build ASAP.
>
> Cheers,
>
>      Mario
>
>
>
> On 08/27/2012 04:55 PM, Melissa Linkert wrote:
>> Hi Mario,
>>
>>> I'm trying to read comment fields from a lossless compressed JPEG200
>>> file, created with Matlab (R2011b, in case it matters). Matlab supports
>>> setting a list of arbitrary comments in the file, by specifying a cell
>>> array of strings as a parameter to imwrite().
>>> See http://www.mathworks.ch/help/techdoc/ref/imwrite.html#bsfqp3l-1.
>>>
>>> I'll send a corresponding image in a separate email. Is it possible
>>> to read the comment fields with BioFormats?
>>
>> Thank you for mentioning this, and for sending a file privately.
>>
>> This commit allows the comments to be read and stored in Bio-Formats'
>> original metadata hashtable:
>>
>> https://github.com/melissalinkert/bioformats/commit/eed5a864fb928511a84f9ec48376639b4431b49e
>>
>>
>> A new development build with that fix should be available within a few
>> days, otherwise the upcoming 4.4.3 version of Bio-Formats will include
>> this fix.
>>
>> Regards,
>> -Melissa
>>
>> On Mon, Aug 27, 2012 at 01:54:09PM +0200, Mario Emmenlauer wrote:
>>>
>>> Dear OME Developers,
>>>
>>> I'm trying to read comment fields from a lossless compressed JPEG200
>>> file, created with Matlab (R2011b, in case it matters). Matlab supports
>>> setting a list of arbitrary comments in the file, by specifying a cell
>>> array of strings as a parameter to imwrite().
>>> See http://www.mathworks.ch/help/techdoc/ref/imwrite.html#bsfqp3l-1.
>>>
>>> I'll send a corresponding image in a separate email. Is it possible
>>> to read the comment fields with BioFormats?
>>>
>>> Thanks and all the best,
>>>
>>>     Mario
>>>
>>>
>>>
>>>
>>> --
>>> Mario Emmenlauer, Dipl.Inf.                  Office: +41-(0)61-26-72200
>>> Biozentrum Basel
>>> Klingelbergstrasse 50/70           mailto: mario.emmenlauer * unibas.ch
>>> CH-4056 Basel                     http://infectx.org/about_us/emmenlau/
>>>
>>>
>>> _______________________________________________
>>> ome-users mailing list
>>> ome-users at lists.openmicroscopy.org.uk
>>> http://lists.openmicroscopy.org.uk/mailman/listinfo/ome-users
>>
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