[ome-users] cell sens dimension tiff metadata

[Melissa Linkert]

Hi Russell,

> I have an honours student with 100s of tiff files taken using
> CellsSens Dimension software:
> http://www.olympusamerica.com/seg_section/product.asp?product=1070&p=247&sub=28&c=18
> 
> We would like to tabulate some of the metadata associated with the
> images. Any chance Bio-Formats can be updated to include pulling the
> metadata from the file?  I'm particularly interested in length/width
> calibration information as well as the exposure value.  I'm posting
> a sample TIFF file here:
> http://people.stfx.ca/rwyeth/downloads/research/sample.tif

Thank you for the report, and for making a file available.  I definitely
see that the physical size information is missing as cellSens Viewer
shows that it should be 354.4 µm x 266.8 µm - we'll work on fixing that
for the next version of Bio-Formats.

However, I don't see the exposure time in cellSens Viewer.  Do you know
what the correct value is for this file?

Regards,
-Melissa

On Tue, Nov 27, 2012 at 01:36:41PM -0400, Russell Wyeth wrote:
> Hi,
> 
> Apologies in advance if this is a repeat question - I could find no
> way to search the archives.
> 
> I have an honours student with 100s of tiff files taken using
> CellsSens Dimension software:
> http://www.olympusamerica.com/seg_section/product.asp?product=1070&p=247&sub=28&c=18
> 
> We would like to tabulate some of the metadata associated with the
> images. Any chance Bio-Formats can be updated to include pulling the
> metadata from the file?  I'm particularly interested in length/width
> calibration information as well as the exposure value.  I'm posting
> a sample TIFF file here:
> http://people.stfx.ca/rwyeth/downloads/research/sample.tif
> 
> Thanks
> Russell
> 
> Russell Wyeth
> Biology, St Francis Xavier University
> P.O. Box 5000 Antigonish, NS B2G 2W5 Canada
> Shipping: 2321 Notre Dame Ave. Antigonish, NS B2G 2W5 Canada
> http://people.stfx.ca/rwyeth/
> Ph: 9028673886 Fx: 9028672389
> Cell: 9023180250
> 
> _______________________________________________
> ome-users mailing list
> ome-users at lists.openmicroscopy.org.uk
> http://lists.openmicroscopy.org.uk/mailman/listinfo/ome-users