[ome-users] Fwd: Problems installing OMERO.server-4.4.4 for Windows7 (32bits)
UNAI LORENZO SIERRA
ulorenzo001 at ikasle.ehu.es
Fri Nov 2 14:23:38 GMT 2012
That worked perfectly!
Thank you very much for your patience and your help.
Cheers,
Unai
Josh Moore <josh at glencoesoftware.com> escribió:
>
> On Nov 2, 2012, at 12:22 PM, UNAI LORENZO SIERRA wrote:
>
>> Hi Josh,
>>
>> Apparently, I've been able to login with `bin\omero login
>> root at localhost` command. I could also start omero web, but I
>> couldn't access OMERO.web (with Username:db_user and
>> Password:db_password).
>
> Can you try to use "root" and the same password as you used for
> `bin\omero login root at localhost`?
>
> Thanks,
> ~Josh.
>
>
>> (pid = 1188, enabled)
>> Server: Tables-0 inactive (disabled)
>> Server: TestDropBox inactive (enabled)
>>
>> Log dir: C:\omero_dist\var\log exists
>>
>> Log files: Blitz-0.log 90.0 KB errors=2
>> warnings=4
>>
>> Log files: DropBox.log 11.0 KB errors=14
>> warnings=7
>>
>> Log files: FileServer.log 2.0 KB
>> Log files: Indexer-0.log 418.0 KB errors=14
>> warnings=30
>>
>> Log files: MonitorServer.log 3.0 KB
>> Log files: OMEROweb.log 113.0 KB errors=32
>> warnings=0
>>
>> Log files: OMEROweb_request.log 0.0 KB
>> Log files: PixelData-0.log 346.0 KB errors=20
>> warnings=22
>>
>> Log files: Processor-0.log 106.0 KB errors=28
>> warnings=56
>>
>> Log files: Tables-0.log n/a
>> Log files: TestDropBox.log n/a
>> Log files: master.err 0.0 KB
>> Log files: master.out 0.0 KB
>> Log files: Total size 1.09 MB
>>
>> Parsing Blitz-0.log:[line:346] => Server restarted <=
>>
>> Environment:OMERO_HOME=(unset)
>> Environment:OMERO_NODE=(unset)
>> Environment:OMERO_MASTER=(unset)
>> Environment:PATH=C:\Python26;C:\Windows\System32;C:\Windows\System32\WindowsPowe
>> rShell\v1.0;C:\Windows\System32\cmd.exe;C:\Program Files\ZeroC\Ice-3.4.2\bin
>> Environment:ICE_HOME=(unset)
>> Environment:LD_LIBRARY_PATH=(unset)
>> Environment:DYLD_LIBRARY_PATH=(unset)
>>
>> OMERO data dir: 'C:\\OMERO' Exists? True Is writable? True
>> OMERO.web status... DEVELOPMENT: You will have to check status by hand!
>>
>>
>> C:\omero_dist>bin\omero login root at localhost
>> Previous session expired for root on localhost:4064
>> Password:
>> Created session 52008c20-73b1-4eac-b46c-decd791e13fb
>> (root at localhost:4064). Idle
>> timeout: 10.0 min. Current group: system
>>
>> C:\omero_dist>bin\omero config set omero.web.application_server development
>>
>> C:\omero_dist>bin\omero config set omero.web.debug True
>>
>> C:\omero_dist>bin\omero config set omero.web.session_engine
>> "django.contrib.sess
>> ions.backends.cache"
>>
>> C:\omero_dist>bin\omero config set omero.web.cache_backend
>> "file://C:/windows/te
>> mp/"
>>
>> C:\omero_dist>bin\omero web start
>>
>> 0 static files copied to 'C:/omero_dist/lib/python/omeroweb/static'
>> (798 unmodif
>> ied).
>> Starting OMERO.web... Validating models...
>>
>> 0 errors found
>> Django version 1.3.1, using settings 'omeroweb.settings'
>> Development server is running at http://0.0.0.0:4080/
>> Quit the server with CTRL-BREAK.
>> [02/Nov/2012 12:08:39] "GET /webclient/ HTTP/1.1" 302 0
>> ----------------------------------------
>> Exception happened during processing of request from ('127.0.0.1', 65352)
>> Traceback (most recent call last):
>> File "C:\Python26\lib\SocketServer.py", line 283, in
>> _handle_request_noblock
>> self.process_request(request, client_address)
>> File "C:\Python26\lib\SocketServer.py", line 309, in process_request
>> self.finish_request(request, client_address)
>> File "C:\Python26\lib\SocketServer.py", line 322, in finish_request
>> self.RequestHandlerClass(request, client_address, self)
>> File "C:\omero_dist\lib\python\django\core\servers\basehttp.py",
>> line 570, in
>> __init__
>> BaseHTTPRequestHandler.__init__(self, *args, **kwargs)
>> File "C:\Python26\lib\SocketServer.py", line 617, in __init__
>> self.handle()
>> File "C:\omero_dist\lib\python\django\core\servers\basehttp.py",
>> line 610, in
>> handle
>> self.raw_requestline = self.rfile.readline()
>> File "C:\Python26\lib\socket.py", line 444, in readline
>> data = self._sock.recv(self._rbufsize)error: [Errno 10054] Se ha
>> forzado la interrupci¾n de una conexi¾n existente por
>> el host remoto
>>
>> ----------------------------------------
>> [02/Nov/2012 12:08:40] "GET /webclient/login/?url=%2Fwebclient%2F
>> HTTP/1.1" 200
>> 3464
>> [02/Nov/2012 12:11:49] "POST /webclient/login/?url=%2Fwebclient%2F
>> HTTP/1.1" 200
>> 3610
>>
>>
>>
>> Cheers,
>> Unai
>>
>>
>>
>>
>>
>> Josh Moore <josh at glencoesoftware.com> escribió:
>>
>>>
>>> On Nov 1, 2012, at 9:33 PM, UNAI LORENZO SIERRA wrote:
>>>
>>>>
>>>> Hi Josh,
>>>
>>> Hi,
>>>
>>>> Thanks for your answer. I'm definitely having problems with all
>>>> the created users and passwords...
>>>>
>>>> Finally, I've been able to populate the database successfully.
>>>> The problem now is the login. This is the error I get:
>>>>
>>>> C:\omero_dist>bin\omero login
>>>> Server: [localhost]
>>>> Username: [Biofisica]
>>>> Password:
>>>> Ice.ConnectionRefusedException: localhost isn't running
>>>>
>>>> C:\omero_dist>
>>>>
>>>>
>>>>
>>>> I've been trying to login with all the passwords I've created
>>>> during the installation (especially with the root_password, of
>>>> course), and I get always the same message.
>>>>
>>>> Do you know if he problem is that I'm using a wrong password, or
>>>> is it a different problem?
>>>
>>> Here, the problem is that OMERO is not running and listening on
>>> port 4064 as it should. Did `bin\omero admin start` complete
>>> successfully? What does `bin\omero admin diagnostics` return?
>>>
>>>
>>>> Appart from that, could you please explain me where the login
>>>> Username (in this case Biofisica) comes from? I don't remember
>>>> creating any username with this name...
>>>
>>> Is that the name of the Windows user? `bin\omero login` tries to
>>> guess a username on your first login. You should probably try
>>> `bin\omero login root at localhost` once the server is running.
>>>
>>> Cheers,
>>> ~Josh.
>>>
>>>
>>>> Thanks,
>>>> Unai
>>>>
>>>>
>>>>
>>>>
>>>> Josh Moore <josh at glencoesoftware.com> escribió:
>>>>
>>>>>
>>>>> On Oct 31, 2012, at 5:03 PM, UNAI LORENZO SIERRA wrote:
>>>>>>
>>>>>> Hi Josh,
>>>>>
>>>>> Hi Unai,
>>>>>
>>>>>> Could you please take a look at the attached image?
>>>>>>
>>>>>> The first error means:
>>>>>>
>>>>>> psql:C:/omero_dist/OMERO4.4__0.sql:25: ERROR: the relation
>>>>>> "acquisitionmode" already exists.
>>>>>
>>>>> That means that the OMERO database schema (OMERO4.4__0.sql) has
>>>>> already been applied (during a previous attempt?). Can you
>>>>> configure OMERO to use the same values and then try restarting
>>>>> the server?
>>>>>
>>>>> Cheers,
>>>>> ~Josh
>>>>>
>>>>>> Cheers,
>>>>>> Unai
>>>>>>
>>>>>>
>>>>>>
>>>>>> Josh Moore <josh at glencoesoftware.com> escribió:
>>>>>>
>>>>>>>
>>>>>>> On Oct 31, 2012, at 4:28 PM, UNAI LORENZO SIERRA wrote:
>>>>>>>
>>>>>>>> Hi Josh,
>>>>>>>
>>>>>>> Hi Unai,
>>>>>>>
>>>>>>>> Thanks for the link. I got mixed with the created usernames
>>>>>>>> and passwords.
>>>>>>>> I've been able to access the database, eventually:
>>>>>>>>
>>>>>>>> Server [localhost]:
>>>>>>>> Database [postgres]: Biophot_database
>>>>>>>> Port [5432]:
>>>>>>>> Username [postgres]: Biofisica
>>>>>>>> Contrase±a para usuario Biofisica:
>>>>>>>> psql (9.2.1)
>>>>>>>> ADVERTENCIA: El código de página de la consola (850) difiere
>>>>>>>> del código
>>>>>>>> de página de Windows (1252).
>>>>>>>> Los caracteres de 8 bits pueden funcionar incorrectamente.
>>>>>>>> Vea la página de referencia de psql «Notes for Windows users»
>>>>>>>> para obtener más detalles.
>>>>>>>> Digite «help» para obtener ayuda.
>>>>>>>>
>>>>>>>> Biophot_database=> \i C:/omero_dist/OMERO4.4__0.sql
>>>>>>>
>>>>>>> Excellent!
>>>>>>>
>>>>>>>
>>>>>>>> When I try to populate the database (using \i
>>>>>>>> C:/omero_dist/OMERO4.4__0.sql) I got some errors. Those
>>>>>>>> errors mean that the orders will be ignored until the end of
>>>>>>>> the transaction. Here are the only ones I've been able to copy:
>>>>>>>>
>>>>>>>>
>>>>>>>> psql:C:/omero_dist/OMERO4.4__0.sql:6899: ERROR: transacción
>>>>>>>> abortada, las órden
>>>>>>>> es serán ignoradas hasta el fin de bloque de transacción
>>>>>>>> ...
>>>>>>>> psql:C:/omero_dist/OMERO4.4__0.sql:7200: ERROR: transacción
>>>>>>>> abortada, las órden
>>>>>>>> es serán ignoradas hasta el fin de bloque de transacción
>>>>>>>> ROLLBACK
>>>>>>>> Biophot_database=> \q
>>>>>>>>
>>>>>>>>
>>>>>>>> Do you know if this could be the cause of my problem?
>>>>>>>
>>>>>>> This will definitely be a problem for OMERO and you won't be
>>>>>>> able to start until you can import OMERO4.4__0.sql
>>>>>>> successfully. However, the reason that you can't import that
>>>>>>> script isn't clear from these lines. Can you find the first
>>>>>>> line that has an ERROR on it?
>>>>>>>
>>>>>>> Cheers,
>>>>>>> ~Josh.
>>>>>>>
>>>>>>>> Thanks,
>>>>>>>> Unai
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>> Josh Moore <josh at glencoesoftware.com> escribió:
>>>>>>>>
>>>>>>>>>
>>>>>>>>> On Oct 31, 2012, at 2:00 PM, UNAI LORENZO SIERRA wrote:
>>>>>>>>>
>>>>>>>>>
>>>>>>>>> Hi Unai,
>>>>>>>>>
>>>>>>>>> Until you can access the database via the PostgreSQL command
>>>>>>>>> line, OMERO definitely won't be able to start. The URL
>>>>>>>>>
>>>>>>>>> https://www.openmicroscopy.org/site/support/omero4/sysadmins/windows/server-installation.html#creating-a-database-as-root
>>>>>>>>>
>>>>>>>>> shows how to make an example database named "omero_database"
>>>>>>>>> with example user "db_user" and example password
>>>>>>>>> "db_password". You changed "omero_database" to
>>>>>>>>> "Biophot_database", did you possibly change "db_user" or
>>>>>>>>> "db_password" similarly?
>>>>>>>>>
>>>>>>>>> Cheers,
>>>>>>>>> ~Josh
>>>>>>>>>
>>>>>>>>>
>>>>>>>>>> Thanks,
>>>>>>>>>> Unai
>>>>>>>>>>
>>>>>>>>>>
>>>>>>>>>> On Oct 31, 2012, at 1:15 PM, Andrew King wrote:
>>>>>>>>>>
>>>>>>>>>> The log definitely shows issues with the database:
>>>>>>>>>>
>>>>>>>>>> Caused by: org.postgresql.util.PSQLException: FATAL: la
>>>>>>>>>> autentificaci?n password fall? para el usuario ?db_user?
>>>>>>>>>>
>>>>>>>>>> Can you access the database using psql? Can you show us the
>>>>>>>>>> full command-line? Also, how have you configured the
>>>>>>>>>> omero.db.* properties via bin\omero config?
>>>>>>>>>>
>>>>>>>>>> Cheers,
>>>>>>>>>> ~Josh.
>>
>>
>>
>
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