[ome-users] Unable to load images using latest ImageJ plugin

[Mark Woodbridge]

Adding the Bio-Formats plugin wasn't sufficient, I had to re-import my 
image. It's no longer a problem for me because I don't have any other 
problematic images, but it was Martin who originally saw the error message.

On 21/07/11 16:46, Will Moore wrote:
> Hi Mark,
>
> You're right. The Bio-Formats plugin is required by the OMERO IJ plugin
> and we need to document this better.
>
> Does this also fix the opening of images imported with older OMERO
> versions?
>
> Will.
>
>
> On 19 Jul 2011, at 15:18, Mark Woodbridge wrote:
>
>> It's now working for me with ImageJ 1.44... the only thing I did was
>> delete and re-import the relevant LSM file into OMERO. Does the plugin
>> depend on some metadata that wouldn't have been available if the file
>> was imported using an older version of OMERO? I don't know if Will and
>> Martin's error is related.
>>
>> By the way, I also found that I couldn't load any images (even JPEG)
>> from OMERO to ImageJ unless I installed the Bio-Formats plugin. This
>> confused me for a while so if this step is necessary then perhaps you
>> could add it to the documentation?
>>
>> Thanks for your help,
>>
>> Mark.
>>
>> On 19/07/11 14:51, Curtis Rueden wrote:
>>> Hi Mark & Will,
>>>
>>> You can change versions of ImageJ by selecting Help > Update ImageJ from
>>> the menu.
>>>
>>> Also, did either of you try the latest version of 1.45?
>>>
>>> -Curtis
>>>
>>> On Tue, Jul 19, 2011 at 4:06 AM, Will Moore <will at lifesci.dundee.ac.uk
>>> <mailto:will at lifesci.dundee.ac.uk>> wrote:
>>>
>>> Hi Mark,
>>>
>>> OK, so I do see the same issue as you when I install ImageJ from
>>> that location: ImageJ 1.44
>>>
>>> But I don't see the problem with my existing ImageJ install, which
>>> is ImageJ 1.43r.
>>>
>>> I'll create a ticket for this, but in the meantime you might want to
>>> see if you can find 1.43 (or maybe try a different version). If not,
>>> I can send you mine!
>>>
>>> Cheers,
>>>
>>> Will
>>>
>>>
>>> On 18 Jul 2011, at 13:32, Will Moore wrote:
>>>
>>> Hi
>>>
>>> - Sorry, just noticed you said "clean" install.
>>>
>>> I'll try installing from the same place and see what I get.
>>> Currently I'm not seeing an error, so somethings different.
>>>
>>> Will.
>>>
>>> On 18 Jul 2011, at 13:29, Will Moore wrote:
>>>
>>> Hi Mark,
>>>
>>> Can you check whether you have any old plugins that may be
>>> causing a conflict?
>>>
>>> "If you have ome-tools.jar in your plugins directory you
>>> need to remove it."
>>> is from this discussion:
>>> https://www.openmicroscopy.__org.uk/community/viewtopic.__php?f=5&t=727
>>> <https://www.openmicroscopy.org.uk/community/viewtopic.php?f=5&t=727>
>>>
>>> Hope that helps?
>>>
>>> Will.
>>>
>>>
>>> On 18 Jul 2011, at 09:35, Mark Woodbridge wrote:
>>>
>>> Hi,
>>>
>>> When clicking 'View' or double-clicking on an image in
>>> the ImageJ OMERO browser I get the message 'An error
>>> occurred while loading the image.'
>>>
>>> This is when using a clean install of:
>>>
>>> http://rsbweb.nih.gov/ij/__download/zips/ij144.zip
>>> <http://rsbweb.nih.gov/ij/download/zips/ij144.zip>
>>>
>>> with
>>>
>>> http://cvs.openmicroscopy.org.__uk/snapshots/omero/OMERO.__imagej-4.3.1.zip
>>>
>>> <http://cvs.openmicroscopy.org.uk/snapshots/omero/OMERO.imagej-4.3.1.zip>
>>>
>>>
>>> and Sun JRE 1.6.0_26 on Linux with OMERO server 4.3.1.
>>>
>>> There is no stack trace printed. Martin has seen the
>>> same problem on Windows.
>>>
>>> Mark.
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>>>
>>>
>>> William Moore
>>> Wellcome Trust Centre for Gene Regulation & Expression
>>> College of Life Sciences
>>> MSI/WTB/JBC Complex
>>> University of Dundee
>>> Dow Street
>>> Dundee DD1 5EH
>>> United Kingdom
>>>
>>> Phone 01382 386364
>>> http://openmicroscopy.org
>>>
>>>
>>>
>>>
>>>
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>>>
>>> William Moore
>>> Wellcome Trust Centre for Gene Regulation & Expression
>>> College of Life Sciences
>>> MSI/WTB/JBC Complex
>>> University of Dundee
>>> Dow Street
>>> Dundee DD1 5EH
>>> United Kingdom
>>>
>>> Phone 01382 386364
>>> http://openmicroscopy.org
>>>
>>>
>>>
>>>
>>>
>>>
>>> William Moore
>>> Wellcome Trust Centre for Gene Regulation & Expression
>>> College of Life Sciences
>>> MSI/WTB/JBC Complex
>>> University of Dundee
>>> Dow Street
>>> Dundee DD1 5EH
>>> United Kingdom
>>>
>>> Phone 01382 386364
>>> http://openmicroscopy.org
>>>
>>>
>>>
>>>
>>>
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>
> William Moore
> Wellcome Trust Centre for Gene Regulation & Expression
> College of Life Sciences
> MSI/WTB/JBC Complex
> University of Dundee
> Dow Street
> Dundee DD1 5EH
> United Kingdom
>
> Phone 01382 386364
> http://openmicroscopy.org
>
>
>
>
>