[ome-users] Imaris <-> Omero

[Christophe TREFOIS]

Dear Gregory,

I'm not sure if this can be done, but in v 7.3 of Imaris, their API is now through ICE as well.
In that case, a direct communication could maybe occur?

Best Regards,

--
Christophe
................................................................................

Dipl.-Ing. Christophe TREFOIS
PhD Student

Ing. Sys. Com. Dipl. EPF

[Description: cid:image001.jpg at 01CACC35.07191DE0]
Luxembourg Centre for Systems Biomedicine
UNIVERSITY OF LUXEMBOURG
CAMPUS LIMPERTSBERG
162a, avenue de la Faïencerie
L-1511 Luxembourg
T +352 46 66 44 6124
F +352 46 66 44 6949
www.lcsb.lu<http://www.uni.lu/>

From: ome-users-bounces at lists.openmicroscopy.org.uk [mailto:ome-users-bounces at lists.openmicroscopy.org.uk] On Behalf Of Gregory Jefferis
Sent: Wednesday, July 20, 2011 9:57 AM
To: ome-users at lists.openmicroscopy.org.uk
Subject: Re: [ome-users] Imaris <-> Omero

Dear OME people,

Although open source software is the target of my personal development efforts, my lab still uses a mix of open and commercial closed source software.  In considering a transition to an image database system like Omero one major consideration is whether all of our software would be able to get convenient access to image (meta)data. It was recently pointed out to me that that the GPL license of the ICE framework used by Omero is a problem for any closed source application that wanted to talk to an Omero server via ICE:

http://zeroc.com/licensing.html

I presume this would include Imaris.  Has anyone looked at this issue in detail?  Thoughts?  Workarounds?

Best wishes,

Greg.




________________________________

[cid:image002.jpg at 01CC46EA.D1C768E0]

Christophe TREFOIS<mailto:christophe.trefois at uni.lu>
19 July 2011 09:00



Dear Ome-users,

Has anybody of you managed to interface Imaris with Omero ?
I would like to import pictures for automatic processing directly into Imaris.

For now, the only way I see is through Imaris's Matlab XT interface, but it seems rather tedious.
Since you'd need to go Omero -> Omero Matlab -> Imaris XT -> Imaris.

Any hints, tips, suggestions are welcome.

Kind Regards,

--
Christophe
................................................................................

Dipl.-Ing. Christophe TREFOIS
PhD Student

Ing. Sys. Com. Dipl. EPF

[Description:                  cid:image001.jpg at 01CACC35.07191DE0]
Luxembourg Centre for Systems Biomedicine
UNIVERSITY OF LUXEMBOURG
CAMPUS LIMPERTSBERG
162a, avenue de la Faïencerie
L-1511 Luxembourg
T +352 46 66 44 6124
F +352 46 66 44 6949
www.lcsb.lu<http://www.uni.lu/>

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--
Gregory Jefferis, PhD                      jefferis at mrc-lmb.cam.ac.uk<mailto:jefferis at mrc-lmb.cam.ac.uk>
Division of Neurobiology                   LMB Lab:   +44 (0)1223 252943
MRC Laboratory of Molecular Biology,       LMB Office:+44 (0)1223 252944
Hills Road,                                LMB Fax:   +44 (0)1223 402310
Cambridge, CB2 0QH, UK.

http://www2.mrc-lmb.cam.ac.uk/group-leaders/h-to-m/g-jefferis
http://www.neuroscience.cam.ac.uk/directory/profile.php?gsxej2
http://flybrain.stanford.edu
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