[ome-users] Unable to load images using latest ImageJ plugin
Mark Woodbridge
m.woodbridge at imperial.ac.uk
Tue Jul 19 15:18:44 BST 2011
It's now working for me with ImageJ 1.44... the only thing I did was
delete and re-import the relevant LSM file into OMERO. Does the plugin
depend on some metadata that wouldn't have been available if the file
was imported using an older version of OMERO? I don't know if Will and
Martin's error is related.
By the way, I also found that I couldn't load any images (even JPEG)
from OMERO to ImageJ unless I installed the Bio-Formats plugin. This
confused me for a while so if this step is necessary then perhaps you
could add it to the documentation?
Thanks for your help,
Mark.
On 19/07/11 14:51, Curtis Rueden wrote:
> Hi Mark & Will,
>
> You can change versions of ImageJ by selecting Help > Update ImageJ from
> the menu.
>
> Also, did either of you try the latest version of 1.45?
>
> -Curtis
>
> On Tue, Jul 19, 2011 at 4:06 AM, Will Moore <will at lifesci.dundee.ac.uk
> <mailto:will at lifesci.dundee.ac.uk>> wrote:
>
> Hi Mark,
>
> OK, so I do see the same issue as you when I install ImageJ from
> that location: ImageJ 1.44
>
> But I don't see the problem with my existing ImageJ install, which
> is ImageJ 1.43r.
>
> I'll create a ticket for this, but in the meantime you might want to
> see if you can find 1.43 (or maybe try a different version). If not,
> I can send you mine!
>
> Cheers,
>
> Will
>
>
> On 18 Jul 2011, at 13:32, Will Moore wrote:
>
> Hi
>
> - Sorry, just noticed you said "clean" install.
>
> I'll try installing from the same place and see what I get.
> Currently I'm not seeing an error, so somethings different.
>
> Will.
>
> On 18 Jul 2011, at 13:29, Will Moore wrote:
>
> Hi Mark,
>
> Can you check whether you have any old plugins that may be
> causing a conflict?
>
> "If you have ome-tools.jar in your plugins directory you
> need to remove it."
> is from this discussion:
> https://www.openmicroscopy.__org.uk/community/viewtopic.__php?f=5&t=727
> <https://www.openmicroscopy.org.uk/community/viewtopic.php?f=5&t=727>
>
> Hope that helps?
>
> Will.
>
>
> On 18 Jul 2011, at 09:35, Mark Woodbridge wrote:
>
> Hi,
>
> When clicking 'View' or double-clicking on an image in
> the ImageJ OMERO browser I get the message 'An error
> occurred while loading the image.'
>
> This is when using a clean install of:
>
> http://rsbweb.nih.gov/ij/__download/zips/ij144.zip
> <http://rsbweb.nih.gov/ij/download/zips/ij144.zip>
>
> with
>
> http://cvs.openmicroscopy.org.__uk/snapshots/omero/OMERO.__imagej-4.3.1.zip
> <http://cvs.openmicroscopy.org.uk/snapshots/omero/OMERO.imagej-4.3.1.zip>
>
> and Sun JRE 1.6.0_26 on Linux with OMERO server 4.3.1.
>
> There is no stack trace printed. Martin has seen the
> same problem on Windows.
>
> Mark.
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>
> William Moore
> Wellcome Trust Centre for Gene Regulation & Expression
> College of Life Sciences
> MSI/WTB/JBC Complex
> University of Dundee
> Dow Street
> Dundee DD1 5EH
> United Kingdom
>
> Phone 01382 386364
> http://openmicroscopy.org
>
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>
> William Moore
> Wellcome Trust Centre for Gene Regulation & Expression
> College of Life Sciences
> MSI/WTB/JBC Complex
> University of Dundee
> Dow Street
> Dundee DD1 5EH
> United Kingdom
>
> Phone 01382 386364
> http://openmicroscopy.org
>
>
>
>
>
>
> William Moore
> Wellcome Trust Centre for Gene Regulation & Expression
> College of Life Sciences
> MSI/WTB/JBC Complex
> University of Dundee
> Dow Street
> Dundee DD1 5EH
> United Kingdom
>
> Phone 01382 386364
> http://openmicroscopy.org
>
>
>
>
>
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