[ome-users] Unable to load images using latest ImageJ plugin

Mark Woodbridge m.woodbridge at imperial.ac.uk
Tue Jul 19 15:18:44 BST 2011


It's now working for me with ImageJ 1.44... the only thing I did was 
delete and re-import the relevant LSM file into OMERO. Does the plugin 
depend on some metadata that wouldn't have been available if the file 
was imported using an older version of OMERO? I don't know if Will and 
Martin's error is related.

By the way, I also found that I couldn't load any images (even JPEG) 
from OMERO to ImageJ unless I installed the Bio-Formats plugin. This 
confused me for a while so if this step is necessary then perhaps you 
could add it to the documentation?

Thanks for your help,

Mark.

On 19/07/11 14:51, Curtis Rueden wrote:
> Hi Mark & Will,
>
> You can change versions of ImageJ by selecting Help > Update ImageJ from
> the menu.
>
> Also, did either of you try the latest version of 1.45?
>
> -Curtis
>
> On Tue, Jul 19, 2011 at 4:06 AM, Will Moore <will at lifesci.dundee.ac.uk
> <mailto:will at lifesci.dundee.ac.uk>> wrote:
>
>     Hi Mark,
>
>     OK, so I do see the same issue as you when I install ImageJ from
>     that location: ImageJ 1.44
>
>     But I don't see the problem with my existing ImageJ install, which
>     is ImageJ 1.43r.
>
>     I'll create a ticket for this, but in the meantime you might want to
>     see if you can find 1.43 (or maybe try a different version). If not,
>     I can send you mine!
>
>     Cheers,
>
>     Will
>
>
>     On 18 Jul 2011, at 13:32, Will Moore wrote:
>
>         Hi
>
>         - Sorry, just noticed you said "clean" install.
>
>         I'll try installing from the same place and see what I get.
>         Currently I'm not seeing an error, so somethings different.
>
>         Will.
>
>         On 18 Jul 2011, at 13:29, Will Moore wrote:
>
>             Hi Mark,
>
>             Can you check whether you have any old plugins that may be
>             causing a conflict?
>
>             "If you have ome-tools.jar in your plugins directory you
>             need to remove it."
>             is from this discussion:
>             https://www.openmicroscopy.__org.uk/community/viewtopic.__php?f=5&t=727
>             <https://www.openmicroscopy.org.uk/community/viewtopic.php?f=5&t=727>
>
>             Hope that helps?
>
>             Will.
>
>
>             On 18 Jul 2011, at 09:35, Mark Woodbridge wrote:
>
>                 Hi,
>
>                 When clicking 'View' or double-clicking on an image in
>                 the ImageJ OMERO browser I get the message 'An error
>                 occurred while loading the image.'
>
>                 This is when using a clean install of:
>
>                 http://rsbweb.nih.gov/ij/__download/zips/ij144.zip
>                 <http://rsbweb.nih.gov/ij/download/zips/ij144.zip>
>
>                 with
>
>                 http://cvs.openmicroscopy.org.__uk/snapshots/omero/OMERO.__imagej-4.3.1.zip
>                 <http://cvs.openmicroscopy.org.uk/snapshots/omero/OMERO.imagej-4.3.1.zip>
>
>                 and Sun JRE 1.6.0_26 on Linux with OMERO server 4.3.1.
>
>                 There is no stack trace printed. Martin has seen the
>                 same problem on Windows.
>
>                 Mark.
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>
>             William Moore
>             Wellcome Trust Centre for Gene Regulation & Expression
>             College of Life Sciences
>             MSI/WTB/JBC Complex
>             University of Dundee
>             Dow Street
>             Dundee DD1 5EH
>             United Kingdom
>
>             Phone 01382 386364
>             http://openmicroscopy.org
>
>
>
>
>
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>
>
>         William Moore
>         Wellcome Trust Centre for Gene Regulation & Expression
>         College of Life Sciences
>         MSI/WTB/JBC Complex
>         University of Dundee
>         Dow Street
>         Dundee DD1 5EH
>         United Kingdom
>
>         Phone 01382 386364
>         http://openmicroscopy.org
>
>
>
>
>
>
>     William Moore
>     Wellcome Trust Centre for Gene Regulation & Expression
>     College of Life Sciences
>     MSI/WTB/JBC Complex
>     University of Dundee
>     Dow Street
>     Dundee DD1 5EH
>     United Kingdom
>
>     Phone 01382 386364
>     http://openmicroscopy.org
>
>
>
>
>
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