[ome-users] installing omero-server problems
camelia botez
camelia.botez at weizmann.ac.il
Thu Jan 20 09:53:22 GMT 2011
I try to install OMERO-sever-beta-4.2.2 - i installed all prerequisites
( some compiling from sources , some with rpm ) on centos 5 platform.
I installed Ice soft using rpms and I start it
from /etc/init.d/icegridnode start - OK.
I ran all the pre-commnds from omero's docs and I try to run
~OMERO_HOME/bin/omero admin start - I get:
[omero at bioinfo01 OMERO.server-Beta-4.2.2]$ bin/omero admin diagnostics
================================================================================
OMERO Diagnostics Beta4.2.2-r8718-Beta4.2-b56
================================================================================
Commands: java -version 1.6.0 (/usr/bin/java)
Commands: python -V 2.4.3 (/usr/bin/python)
Commands: icegridnode --version 3.3.1
(/usr/bin/icegridnode)
Commands: icegridadmin --version 3.3.1
(/usr/bin/icegridadmin)
Commands: psql --version 8.1.22 (/usr/bin/psql)
Server: icegridnode not started
Log dir: /home/omero/OMERO.server-Beta-4.2.2/var/log exists
Log files: Blitz-0.log n/a
Log files: DropBox.log n/a
Log files: FileServer.log n/a
Log files: Indexer-0.log n/a
Log files: MonitorServer.log n/a
Log files: OMEROweb.log 0.0 KB
Log files: Processor-0.log n/a
Log files: Tables-0.log n/a
Log files: TestDropBox.log n/a
Log files: Total size 0.00 MB
Error while parsing logs
Environment:OMERO_HOME=/home/omero/OMERO.server-Beta-4.2.2
Environment:OMERO_NODE=node1
Environment:OMERO_MASTER=
Environment:PATH=/usr/lib64/qt-3.3/bin:/usr/kerberos/bin:/usr/local/bin:/bin:/usr/bin:/home/omero/bin
Environment:ICE_HOME=/usr/local/src/CCG/Ice-3.3.1-64
Environment:LD_LIBRARY_PATH=/usr/lib64/python2.4:/usr/lib64
Environment:DYLD_LIBRARY_PATH=(unset)
OMERO data dir: '/OMERO' Exists? True Is writable? True
OMERO.web status... [NOT STARTED]
[omero at bioinfo01 OMERO.server-Beta-4.2.2]$ bin/omero admin start
Could not find file: /home/omero/OMERO.server-Beta-4.2.2/etc/.cfg
Did you specify the proper node?
and if I run
$OMERO_HOME/bin/omero admin disgnostics I get an output list different
from docs (part of servers status is missing and icegridnode reported
not runningeven I started it).
[omero at bioinfo01 OMERO.server-Beta-4.2.2]$ bin/omero admin diagnostics
================================================================================
OMERO Diagnostics Beta4.2.2-r8718-Beta4.2-b56
================================================================================
Commands: java -version 1.6.0 (/usr/bin/java)
Commands: python -V 2.4.3 (/usr/bin/python)
Commands: icegridnode --version 3.3.1
(/usr/bin/icegridnode)
Commands: icegridadmin --version 3.3.1
(/usr/bin/icegridadmin)
Commands: psql --version 8.1.22 (/usr/bin/psql)
Server: icegridnode not started
Log dir: /home/omero/OMERO.server-Beta-4.2.2/var/log exists
Log files: Blitz-0.log n/a
Log files: DropBox.log n/a
Log files: FileServer.log n/a
Log files: Indexer-0.log n/a
Log files: MonitorServer.log n/a
Log files: OMEROweb.log 0.0 KB
Log files: Processor-0.log n/a
Log files: Tables-0.log n/a
Log files: TestDropBox.log n/a
Log files: Total size 0.00 MB
Error while parsing logs
Environment:OMERO_HOME=/home/omero/OMERO.server-Beta-4.2.2
Environment:OMERO_NODE=(unset)
Environment:OMERO_MASTER=(unset)
Environment:PATH=/usr/lib64/qt-3.3/bin:/usr/kerberos/bin:/usr/local/bin:/bin:/usr/bin:/home/omero/bin
Environment:ICE_HOME=(unset)
Environment:LD_LIBRARY_PATH=/usr/lib64/python2.4:/usr/lib64
Environment:DYLD_LIBRARY_PATH=(unset)
OMERO data dir: '/OMERO' Exists? True Is writable? True
OMERO.web status... [NOT STARTED]
What I'm missing here that I cannot start omero?
Thank for any help
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