[ome-users] Importing .lif images

[Paulo Almeida]

Hi Curtis,

I just realized the behavior you describe is probably the same my user is 
getting, but you are using only one sample file. My user's problem is that 
when she imports two .lif files all the image series are in the same dataset, 
so she can't easily distinguish them.

- Paulo

On Wednesday 02 September 2009 21:24:24 Curtis Rueden wrote:
> Hi Paulo,
>
> I was looking through the mailing list archives and saw Brian's e-mail from
>
> > April, regarding different possibilities for handling images inside .lif
> > files. Can you tell me what is the status on that? (Sorry if the
> > information
> > is available somewhere, I couldn't find it). I'm asking because a user
> > here tried importing two .lif files and she complained that the images
> > were all together. My server version is 4.0.3, and so are the clients.
>
> I just tested LIF import with a sample file with three image series, and
> found that it does create three Images, as expected. They are named
> according to the internal LIF names (in my case, "Series004," "Series009"
> and "Series009_ProjMax").
>
> So, what exactly is the behavior that your user does not like? Are multiple
> image series being combined into a single Image when imported? If so, it
> may be a bug in Bio-Formats (try opening the LIF file using the Bio-Formats
> Importer in ImageJ and see whether it detects multiple series there, as
> well). Or is it something else?
>
> -Curtis
>
> 2009/8/28 Paulo Almeida <palmeida at igc.gulbenkian.pt>
>
> > Hi,
> >
> > I was looking through the mailing list archives and saw Brian's e-mail
> > from April, regarding different possibilities for handling images inside
> > .lif files. Can you tell me what is the status on that? (Sorry if the
> > information
> > is available somewhere, I couldn't find it). I'm asking because a user
> > here tried importing two .lif files and she complained that the images
> > were all together. My server version is 4.0.3, and so are the clients.
> >
> > Thanks,
> > Paulo
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