[ome-users] Problems during OME installation - MOD_PERL is not working properly
Curtis Rueden
ctrueden at wisc.edu
Fri Jan 16 23:38:47 GMT 2009
Hi Arnon,
Strange, it does indeed look the mod_perl test is working, so I'm not sure
why the installer is failing on that step. IIRC the installer just uses
curl, so you could try accessing the URL with curl rather than your web
browser.
Please note that the OME server 2.x is no longer under active development,
and we can only provide limited support. We suggest you try the OMERO
server, which is currently under active development and better supported
than the legacy OME server. If there is a feature you want that OME 2.x has,
that OMERO doesn't have, we are definitely interested in hearing about it!
-Curtis
On Fri, Jan 16, 2009 at 2:15 AM, Kinneret Lab <kinneret.lab at gmail.com>wrote:
> Hi,
>
>
> I've a problem while installing OME server on centOS 5 at the stage of
>
> Apache configuration :
>
> I get this output during the installation:
> -------------------------------------------------------------------------------------------------------------------
>
> .
> .
> .
> Apache configuration:
> Configure Apache?: yes
> Developer configuration: no
> Server restart?: yes
> Install OME servers:
> Images (omeis): yes
> Data (omeds): yes
>
>
> Web: yes
> Apache directories:
> httpd binary: /usr/sbin/httpd
> apachectl binary: /usr/sbin/apachectl
> DocumentRoot: /var/www/html
> cgi-bin: /var/www/cgi-bin
>
>
> Web-UI HTML Templates:
> Developer configuration: no
>
> Are these values correct ? [y/n]:
> [Fri Jan 16 09:18:40 2009] [warn] module perl_module is already loaded, skipping
> [Fri Jan 16 09:18:40 2009] [warn] The ScriptAlias directive in /OME/conf/httpd2.omeis.conf at line 2 will probably never match because it overlaps an earlier ScriptAlias.
>
>
> Testing Apache configuration
> \__ mod_perl [FAILURE].
>
>
> Errors executing task: Apache/mod_perl is not properly configured.
> Did not get a response from http://localhost/perl2/mod_perl_test.pl.
>
>
> See /var/tmp/OME/install/ApacheConfigTask.log for more details. at (eval 187) line 1
>
> at install.pl line 82
> main::run_tasks() called at install.pl line 266
> # Looks like your test died before it could output anything.
>
>
>
> -------------------------------------------------------------------------------------------------
>
> The ApacheConfigTask.log show this:
>
> Apache setup
> Apache binary: /usr/sbin/httpd
> apachectl binary: /usr/sbin/apachectl
>
>
> httpd root: /etc/httpd
> httpd conf: /etc/httpd/conf/httpd.conf
> httpd version: 2
> Apache configuration:
> Configure Apache?: yes
> Developer configuration: no
> Server restart?: yes
> Install OME servers:
>
>
> Images (omeis): yes
> Data (omeds): yes
> Web: yes
> Apache directories:
> httpd binary: /usr/sbin/httpd
> apachectl binary: /usr/sbin/apachectl
>
>
> DocumentRoot: /var/www/html
> cgi-bin: /var/www/cgi-bin
> Web-UI HTML Templates:
> Developer configuration: no
> Configuring Apache
> httpd.conf is /etc/httpd/conf/httpd.conf
> Installing OMEIS
>
>
> Copying src/C/omeis/omeis to /var/www/cgi-bin/omeis
> chmod 0755 /var/www/cgi-bin/omeis
> chown /var/www/cgi-bin/omeis to uid: 48 gid: 501
> Set APACHE_OMEIS_INCLUDE to Include /OME/conf/httpd2.omeis.conf
> Forking a process to upgrade OMEIS
>
>
> Installing OMEDS
> Set APACHE_OMEDS_INCLUDE to Include /OME/conf/httpd2.omeds.conf
> Installing WEB
> Copying src/perl2/serve.pl to /OME/perl2/serve.pl
> chmod 0755 /OME/perl2/serve.pl
> chown /OME/perl2/serve.pl to uid: 48 gid: 501
>
>
> Copying src/html/index.html to /var/www/html/index.html
> chmod 0644 /var/www/html/index.html
> chmod 0644 /var/www/html/favicon.ico
> Set APACHE_WEB_INCLUDE to Include /OME/conf/httpd2.web.conf
> Installing DAE web by copying NonblockingSlaveWorkerCGI
>
>
> Copying src/perl2/OME/Analysis/Engine/NonblockingSlaveWorkerCGI.pl to /OME/perl2/NonblockingSlaveWorkerCGI.pl
> chmod 0755 /OME/perl2/NonblockingSlaveWorkerCGI.pl
> chown /OME/perl2/NonblockingSlaveWorkerCGI.pl to uid: 48 gid: 501
>
>
> Installing OME-startup.pl
> Copying src/perl2/OME-startup.pl to /OME/conf/OME-startup.pl
> chown /OME/conf/OME-startup.pl to uid: 48 gid: 501
> Fixing variables in conf/httpd.ome.*.conf
> Replacing %OME_DIST_BASE with /home/arnon/Desktop/OME-2.6.1
>
>
> Replacing %OME_INSTALL_BASE with /OME
> Reading /OME/conf/httpd.ome.conf
> Writing /OME/conf/httpd.ome.conf
> Reading /OME/conf/httpd.omeds-dev.conf
> Writing /OME/conf/httpd.omeds-dev.conf
> Reading /OME/conf/httpd.omeds.conf
>
>
> Writing /OME/conf/httpd.omeds.conf
> Reading /OME/conf/httpd.omeis-dev.conf
> Writing /OME/conf/httpd.omeis-dev.conf
> Reading /OME/conf/httpd.omeis.conf
> Writing /OME/conf/httpd.omeis.conf
> Reading /OME/conf/httpd.web-dev.conf
>
>
> Writing /OME/conf/httpd.web-dev.conf
> Reading /OME/conf/httpd.web.conf
> Writing /OME/conf/httpd.web.conf
> Reading /OME/conf/httpd1.99.omeds-dev.conf
> Writing /OME/conf/httpd1.99.omeds-dev.conf
> Reading /OME/conf/httpd1.99.omeds.conf
>
>
> Writing /OME/conf/httpd1.99.omeds.conf
> Reading /OME/conf/httpd1.99.omeis-dev.conf
> Writing /OME/conf/httpd1.99.omeis-dev.conf
> Reading /OME/conf/httpd1.99.omeis.conf
> Writing /OME/conf/httpd1.99.omeis.conf
> Reading /OME/conf/httpd1.99.web-dev.conf
>
>
> Writing /OME/conf/httpd1.99.web-dev.conf
> Reading /OME/conf/httpd1.99.web.conf
> Writing /OME/conf/httpd1.99.web.conf
> Reading /OME/conf/httpd2.omeds-dev.conf
> Writing /OME/conf/httpd2.omeds-dev.conf
> Reading /OME/conf/httpd2.omeds.conf
>
>
> Writing /OME/conf/httpd2.omeds.conf
> Reading /OME/conf/httpd2.omeis-dev.conf
> Writing /OME/conf/httpd2.omeis-dev.conf
> Reading /OME/conf/httpd2.omeis.conf
> Writing /OME/conf/httpd2.omeis.conf
> Reading /OME/conf/httpd2.web-dev.conf
>
>
> Writing /OME/conf/httpd2.web-dev.conf
> Reading /OME/conf/httpd2.web.conf
> Writing /OME/conf/httpd2.web.conf
> Reading /OME/conf/httpd.ome.conf
> Writing /OME/conf/httpd.ome.conf
> Restarting Apache
> Executing /usr/sbin/apachectl restart
>
>
> Getting an OME::Util::cURL user agent
> Generated mod_perl test script:
> #!/usr/bin/perl -w
> use strict;
> use CGI qw/-no_xhtml/;
>
> my $CGI = CGI->new();
> print $CGI->header(-type => 'text/plain'),
>
>
>
> my ($key,$value);
> while ( ($key, $value) = each %ENV)
> {
> print "$key = $value\n";
> }
>
>
> 1;
>
> Writing script to /OME/perl2/mod_perl_test.pl
> Getting response from http://localhost/perl2/mod_perl_test.pl
>
>
> Apache/mod_perl is not properly configured. Did not get a response from http://localhost/perl2/mod_perl_test.pl.
>
> -----------------------------------------------------------------------------------------------------------------------------
>
>
> When I access the file directly in my web browser "http://localhost/perl2/mod_perl_test.pl"
> , this is the output I get:
>
> SCRIPT_NAME = /perl2/mod_perl_test.pl
>
>
> SERVER_NAME = localhost
> SERVER_ADMIN = root at localhost
> HTTP_ACCEPT_ENCODING = gzip,deflate
> HTTP_CONNECTION = keep-alive
> REQUEST_METHOD = GET
> HTTP_ACCEPT = text/html,application/xhtml+xml,application/xml;q=0.9,*/*;q=0.8
>
>
> SCRIPT_FILENAME = /OME/perl2/mod_perl_test.pl
> SERVER_SOFTWARE = Apache/2.2.3 (CentOS)
> HTTP_ACCEPT_CHARSET = ISO-8859-1,utf-8;q=0.7,*;q=0.7
> QUERY_STRING =
> REMOTE_PORT = 39160
> HTTP_USER_AGENT = Mozilla/5.0 (X11; U; Linux x86_64; en-US; rv:1.9.0.5) Gecko/2008121911 CentOS/3.0.5-1.el5.centos Firefox/3.0.5
>
>
> SERVER_PORT = 80
> SERVER_SIGNATURE = <address>Apache/2.2.3 (CentOS) Server at localhost Port 80</address>
>
> HTTP_ACCEPT_LANGUAGE = en-us,en;q=0.5
> REMOTE_ADDR = 127.0.0.1
> HTTP_KEEP_ALIVE = 300
>
> SERVER_PROTOCOL = HTTP/1.1
>
> MOD_PERL_API_VERSION = 2
> PATH = /usr/bin/:/usr/local/bin/:/sw/bin/
> REQUEST_URI = /perl2/mod_perl_test.pl
> GATEWAY_INTERFACE = CGI/1.1
> SERVER_ADDR = 127.0.0.1
> DOCUMENT_ROOT = /var/www/html
> HTTP_HOST = localhost
>
>
> MOD_PERL = mod_perl/2.0.2
> -----------------------------------------------------------------------------------------------------------------------
>
> I guess it means that the script works well ...right ? so I'm not sure what is the problem...
>
>
> Could someone please assist me in resolving this problem
>
>
>
> Thanks in advance, Arnon.
>
>
>
>
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> ome-users at lists.openmicroscopy.org.uk
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>
>
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