[ome-users] NumberFormatException import .zvi file

[Curtis Rueden]

Hi Susan,

That exception looks like a bug in Bio-Formats to me. Are you able to import
the ZVI file into ImageJ using the Bio-Formats Importer plugin (
http://www.loci.wisc.edu/ome/formats-imagej.html) with the latest trunk
build (http://www.loci.wisc.edu/ome/formats-download.html)?

-Curtis

On Wed, Sep 24, 2008 at 3:09 PM, Susan Wilson <smwilson at hpc.unm.edu> wrote:

> Hi,
>
> Runniing Beta3.0.1 all around.  This is the error I get when I attempt
> to import a .zvi file:
>
> java.lang.NumberFormatException: For input string: "9/17/2008 7:05:39
> PM"
>        at
> java
> .lang.NumberFormatException.forInputString(NumberFormatException.java:
> 48)
>        at java.lang.Long.parseLong(Long.java:412)
>        at java.lang.Long.parseLong(Long.java:461)
>        at
> loci.formats.in.ZeissZVIReader.initMetadata(ZeissZVIReader.java:623)
>        at loci.formats.in.ZeissZVIReader.initFile(ZeissZVIReader.java:513)
>        at loci.formats.FormatReader.setId(FormatReader.java:216)
>        at loci.formats.ImageReader.setId(ImageReader.java:565)
>        at loci.formats.ReaderWrapper.setId(ReaderWrapper.java:71)
>        at loci.formats.ChannelFiller.setId(ChannelFiller.java:186)
>        at loci.formats.ReaderWrapper.setId(ReaderWrapper.java:71)
>        at loci.formats.ChannelSeparator.setId(ChannelSeparator.java:61)
>        at loci.formats.ReaderWrapper.setId(ReaderWrapper.java:71)
>        at ome.formats.importer.ImportLibrary.open(ImportLibrary.java:181)
>        at
> ome.formats.importer.ImportLibrary.importImage(ImportLibrary.java:
> 355)
>        at
> ome.formats.importer.ImportHandler.importImages(ImportHandler.java:
> 172)
>        at
> ome.formats.importer.ImportHandler.access$0(ImportHandler.java:106)
>        at ome.formats.importer.ImportHandler$1.run(ImportHandler.java:87)
>
> Also, I may be crazy, but the documentation for OMERO.insight does not
> match what I am seeing.  This error is on my MAC to OMERO.server on
> debian.  I downloaded and ran both (linux) importer and insight on the
> localhost debian host and got the same importer error and the same
> insight application.  Help/About shows Beta3.0.1, which is the server
> I am running, but insight has no categories, no "Browse Button"...
> And importer won't import the zvi on either platform.
>
> Thanks.
> Susan
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>
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