[ome-users] connection problem.

Woodbridge, Mark R m.woodbridge at imperial.ac.uk
Tue Oct 14 22:40:01 BST 2008


For what it's worth: we've done a clean install of Beta3.1.1, and
upgraded our existing Beta3.0 system using the instructions, and haven't
had any issues in either case. We're using PostgreSQL 8.3. Thanks to the
OMERO team for all the hard work with the new release!

Mark.

> -----Original Message-----
> From: ome-users-bounces at lists.openmicroscopy.org.uk 
> [mailto:ome-users-bounces at lists.openmicroscopy.org.uk] On 
> Behalf Of Jason Swedlow
> Sent: 14 October 2008 22:02
> To: Indro Fedrigo
> Cc: ome-users at lists.openmicroscopy.org.uk
> Subject: Re: [ome-users] connection problem.
> 
> Hi Indro-
> 
> Please register with the list-- it just helps everyone.  If 
> you find that is not working, just let us know.
> 
> Working from TRUNK is a REALLY BAD IDEA right now, as we are 
> undergoing huge changes in preparation for Beta4.  We really 
> won't be able to support you at all.
> 
> Honestly, we have over 300 OMERO installations up and 
> running, so we know this should work.  If you are having a 
> problem with Beta3.1.1, let's work it out.  That will be the 
> fastest way to help you, and help the OME community at the same time.
> 
> Cheers,
> 
> Jason
> 
> 
> On 14 Oct 2008, at 21:43, Indro Fedrigo wrote:
> 
> > Hi Jason,
> >
> > I am rebuilding it from the trunk, so the instructions are 
> not really 
> > applicable...what happened to setup-db?
> >
> > Thank you,
> >
> > Indro
> >
> >
> >
> >
> > Jason Swedlow wrote:
> >> Hi Indro-
> >>
> >> On 14 Oct 2008, at 21:11, Indro Fedrigo wrote:
> >>
> >>> Thank you Jason,
> >>>
> >>> 1. I just re-installed it completely, to be safe...
> >>>
> >>> 2. I'll double check the instructions, diligently..
> >>>
> >>> 3. I have been trying to forward it myself, but it was rejected...
> >>
> >> Hmmm.  Did you register?
> >>
> >> http://www.openmicroscopy.org/site/community
> >>
> >>> 4. Thanks again, I'll let you now,
> >>
> >> Great, thanks.
> >>
> >> Cheers,
> >>
> >> Jason
> >>
> >>
> >>>
> >>> Indro
> >>>
> >>>
> >>>
> >>> Jason Swedlow wrote:
> >>>> Hi Indro-
> >>>>
> >>>> Questions:
> >>>>
> >>>> 1.  Is this a new install or upgrade?  if an upgrade, see the 
> >>>> recent thread on the list.
> >>>>
> >>>> 2.  Please do ensure you have followed our directions for 
> >>>> installation exactly.  This includes accessing OMERO for 
> the first 
> >>>> time and setting up user accounts.  The detailed 
> instructions are 
> >>>> at available at:
> >>>>
> >>>> http://trac.openmicroscopy.org.uk/omero/wiki
> >>>>
> >>>> 3.  See above, I hope it's OK I have forwarded your query to the
> >>>> ome-
> >>>> users list.
> >>>>
> >>>> If you continue to have problems, please let us know.
> >>>>
> >>>> Cheers,
> >>>>
> >>>> Jason
> >>>>
> >>>>
> >>>> On 14 Oct 2008, at 20:57, Indro Fedrigo wrote:
> >>>>
> >>>>
> >>>>> Hi all,
> >>>>>
> >>>>> I am trying to get 3.1.1 up and running, but I am stuck on the 
> >>>>> when I try to connect from the 127.0.0.1:8080/WebAdmin page:
> >>>>>
> >>>>>
> >>>>>> From the JBOSS log:
> >>>>>>
> >>>>> 2008-10-14 12:28:08,634 WARN
> >>>>> [ome.services.sessions.SessionManagerImpl]
> >>>>> (.0.1:5839]) Failed to authenticate: indro
> >>>>> 2008-10-14 12:28:08,734 WARN
> >>>>> [ome.services.sessions.SessionManagerImpl]
> >>>>> (.0.1:5840]) Failed to authenticate: indro
> >>>>>
> >>>>> Previously the commands
> >>>>>
> >>>>> java omero addgroup
> >>>>> java omero adduser
> >>>>>
> >>>>> use to be there, know it seems they are not...
> >>>>>
> >>>>> Sorry for what is probably a trivial issue, but I would really 
> >>>>> appreciate any help...
> >>>>>
> >>>>> Any file/configuration should I be looking at?
> >>>>>
> >>>>> Thanks a lot
> >>>>>
> >>>>>
> >>>>>
> >>>>>
> >>>>>
> >>>>> --
> >>>>> Indro Fedrigo
> >>>>> Molecular and Cell Biology
> >>>>> 16 Barker Hall
> >>>>> University of California Berkeley
> >>>>> Berkeley, CA 94720-3202
> >>>>> (510) 387-5389
> >>>>>
> >>>>>
> >>>>
> >>>>
> >>>>
> >>>> **************************
> >>>> Wellcome Trust Centre for Gene Regulation & Expression 
> College of 
> >>>> Life Sciences MSI/WTB/JBC Complex University of Dundee 
> Dow Street 
> >>>> Dundee  DD1 5EH United Kingdom
> >>>>
> >>>> phone (01382) 385819
> >>>> Intl phone:  44 1382 385819
> >>>> FAX   (01382) 388072
> >>>> email: jason at lifesci.dundee.ac.uk
> >>>>
> >>>> Lab Page: http://www.dundee.ac.uk/lifesciences/swedlow/
> >>>> Open Microscopy Environment: http://openmicroscopy.org
> >>>> **************************
> >>>>
> >>>> The University of Dundee is a Scottish Registered Charity, No.
> >>>> SC015096.
> >>>>
> >>>>
> >>>>
> >>>> _______________________________________________
> >>>> ome-users mailing list
> >>>> ome-users at lists.openmicroscopy.org.uk
> >>>> http://lists.openmicroscopy.org.uk/mailman/listinfo/ome-users
> >>>>
> >>>
> >>> --
> >>> Indro Fedrigo
> >>> Molecular and Cell Biology
> >>> 16 Barker Hall
> >>> University of California Berkeley
> >>> Berkeley, CA 94720-3202
> >>> (510) 387-5389
> >>>
> >>
> >>
> >>
> >> **************************
> >> Wellcome Trust Centre for Gene Regulation & Expression College of 
> >> Life Sciences MSI/WTB/JBC Complex University of Dundee Dow Street 
> >> Dundee  DD1 5EH United Kingdom
> >>
> >> phone (01382) 385819
> >> Intl phone:  44 1382 385819
> >> FAX   (01382) 388072
> >> email: jason at lifesci.dundee.ac.uk
> >>
> >> Lab Page: http://www.dundee.ac.uk/lifesciences/swedlow/
> >> Open Microscopy Environment: http://openmicroscopy.org
> >> **************************
> >>
> >> The University of Dundee is a Scottish Registered Charity, No.  
> >> SC015096.
> >>
> >>
> >>
> >>
> >
> > --
> > Indro Fedrigo
> > Molecular and Cell Biology
> > 16 Barker Hall
> > University of California Berkeley
> > Berkeley, CA 94720-3202
> > (510) 387-5389
> >
> 
> 
> 
> **************************
> Wellcome Trust Centre for Gene Regulation & Expression
> College of Life Sciences
> MSI/WTB/JBC Complex
> University of Dundee
> Dow Street
> Dundee  DD1 5EH
> United Kingdom
> 
> phone (01382) 385819
> Intl phone:  44 1382 385819
> FAX   (01382) 388072
> email: jason at lifesci.dundee.ac.uk
> 
> Lab Page: http://www.dundee.ac.uk/lifesciences/swedlow/
> Open Microscopy Environment: http://openmicroscopy.org
> **************************
> 
> The University of Dundee is a Scottish Registered Charity, 
> No. SC015096.
> 
> 
> 
> _______________________________________________
> ome-users mailing list
> ome-users at lists.openmicroscopy.org.uk
> http://lists.openmicroscopy.org.uk/mailman/listinfo/ome-users
> 



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