[ome-users] Trouble opening archived images

Melissa Linkert linkert at wisc.edu
Thu Jun 12 19:33:07 BST 2008


Hi Nathan,
I'm sorry to hear that Bio-Formats is unable to open your Deltavision files.
 You might try using the latest daily build of Bio-Formats (available at
http://loci.wisc.edu/ome/formats-download.html) - a problem similar to this
was fixed not too long ago.

If the latest daily build still doesn't work, could you please send one of
the files that produces this error?  If the file is less than 15 MB, you can
send it as an email attachment; otherwise, I can provide you with our FTP
server information off-list.

Regards,
-Melissa

On Thu, Jun 12, 2008 at 11:17 AM, Nathan Brady <n8brady at gmail.com> wrote:

> Hi,
>
> I have uploaded image stacks (Deltavision) into Omero, using the 'archive'
> option.  Using Insight I can download the original files (.dv), however I
> cannot open them.
>
> Using ImageJ and the latest Bio-formats importer I receive the following
> error message:
>
> /////////////////
> java.lang.ArithmeticException: / by zero
>  at loci.formats.in.DeltavisionReader.initFile(DeltavisionReader.java:295)
>  at loci.formats.FormatReader.setId(FormatReader.java:633)
>  at loci.formats.FormatHandler.setId(FormatHandler.java:134)
>  at loci.plugins.Importer.run(Importer.java:145)
>  at loci.plugins.LociImporter.run(LociImporter.java:74)
>  at ij.IJ.runUserPlugIn(IJ.java:273)
>  at ij.IJ.runPlugIn(IJ.java:117)
>  at ij.Executer.runPlugIn(Executer.java:171)
>  at ij.Executer.runCommand(Executer.java:133)
>  at ij.Executer.run(Executer.java:63)
>  at java.lang.Thread.run(Unknown Source)
> /////////////////
>
> Any ideas?
>
>
> Thanks!
>
> Nathan
>
> --------------------------------
>
> Nathan Brady
> University of Heidelberg- BIOQUANT
> Im Neuenheimer Feld 267
> 69120 Heidelberg, Germany
> Office tel :+49-6221-5451287
> Lab tel :+49-6221-5451286
>
>
> _______________________________________________
> ome-users mailing list
> ome-users at lists.openmicroscopy.org.uk
> http://lists.openmicroscopy.org.uk/mailman/listinfo/ome-users
>
>
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