[ome-users] Importer + Insight issues

[Brian Loranger]

Hi Mark,

This does seem like an importer error of some kind. We recall a 3.01  
bug we caught post 3.01 which could be the problem. Is it possible to  
get you to send me one of your tiffs and I can confirm the problem?

Also, you may want to try the 3.0 importer and see if that works for  
you (that problem is 3.01 only).

You can send the file to:

        brian.loranger AT lifesci DOT dundee.ac.uk

And if its too large, let me know and we can arrange to get it sent  
via ftp.

Cheers,

Brian Loranger
Software Developer, Open Microscopy Environment
Division of Gene Regulation and Expression
University of Dundee



On 16 Jul 2008, at 13:59, Woodbridge, Mark R wrote:

> Hi,
>
> I've been using Beta-3.0.1 for a few days. I'm impressed with it so  
> far,
> but am having a few problems. Was just wondering if these were known
> issues?
>
> 1. I have a tiff file which seems to send the Importer (or server)  
> into
> an infinite loop. The importer gets to status 9/9 but never  
> finishes and
> the server log contains the same messages again and again. I'm  
> happy to
> send the relevant files off-list to anyone who might be able to help.
> After terminating the importer the file does appear to have been
> successfully uploaded.
>
> 2. I have a collection of tiffs, with an associated .lei file. When I
> try to import the lei file the importer eventually times-out and  
> appears
> to leave the database in an inconsistent state. This seems like  
> quite a
> serious problem. I won't be able to send the whole dataset (it is work
> in progress) but again I can send any relevant logs. I have  
> submitted a
> bug report about this through the importer itself.
>
> 3. I have successfully imported some other tiffs, but whenever I  
> try to
> view them in the client it hangs. This only occurs on Linux, and  
> not on
> Windows. The files are about 3MB raw. This is on a clean Ubuntu 8.04.1
> system with Java 1.6.0_07.
>
> Any advice would be much appreciated. Perhaps I need to change our
> server configuration?
>
> Mark.
> _______________________________________________
> ome-users mailing list
> ome-users at lists.openmicroscopy.org.uk
> http://lists.openmicroscopy.org.uk/mailman/listinfo/ome-users

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