[ome-users] omero installation problem

josh.moore at gmx.de josh.moore at gmx.de
Tue Dec 30 10:06:54 GMT 2008


James-

Great to hear. Best wishes & a Happy New Year,

~Josh

James Chen writes:
 > Hi Josh,
 > The omero installation wasn't working last week, but it is now! even with
 > the error messages. I read on the troubleshooting page that if the
 > installation is working, then these errors are not a big deal, so I think I
 > am ok for now.
 > 
 > Thanks,
 > James
 > 
 > On Fri, Dec 26, 2008 at 4:36 AM, <josh.moore at gmx.de> wrote:
 > 
 > > James Chen writes:
 > >  > Hi everyone,
 > >
 > > Hi James.
 > >
 > > The emma_ant.properties is not related, and the java.util.prefs
 > > "error" is more annoying than anything else and points to a Java
 > > installation issue.
 > >
 > > Can you tell us what problems you're having with the server and
 > > possibly provide the server log
 > > (jboss-4.2.3.GA/server/default/log/server.log)?  If you've had
 > > specific issues with the importer or insight, you might also provide
 > > those logs (e.g. $HOME/omero/log/omeroinsight.log).
 > >
 > > Best wishes,
 > > ~Josh.
 > >
 > >  >  I'm trying to install the latest version of omero onto an
 > >  >  ubuntu machine, but I'm having a problem starting the
 > >  >  server. This is the error message I get from the run.sh:
 > >  >
 > >  > 16:50:42,909 INFO [WebService] Using RMI server codebase:
 > >  > http://NSCOR:8083/ 16:50:42,925 INFO
 > >  > [Log4jService$URLWatchTimerTask] Configuring from > > URL:
 > >  > resource:jboss-log4j.xml 2008-12-22 16:51:15,190 ERROR [
 > >  > STDERR] ( main) Dec 22, 2008 4:51:15 PM > >
 > >  > java.util.prefs.FileSystemPreferences$7 run WARNING: Prefs
 > >  > file removed in background
 > >  > /home/james/.java/.userPrefs/prefs.xml 2008-12-22 16:51:15,192
 > >  > ERROR [ STDERR] ( main) Dec 22, 2008 4:51:15 PM > >
 > >  > java.util.prefs.FileSystemPreferences$7 run WARNING: Prefs
 > >  > file removed in background > >
 > >  > /etc/.java/.systemPrefs/prefs.xml 2008-12-22 16:51:45,173
 > >  > ERROR [ STDERR] > > ( Timer-3) Dec 22, 2008 4:51:45 PM
 > >  > java.util.prefs.FileSystemPreferences syncWorld WARNING:
 > >  > Couldn't flush system prefs:
 > >  > java.util.prefs.BackingStoreException:
 > >  > /etc/.java/.systemPrefs/omero create failed.
 > >  >
 > >  > The last error then repeats every 30 seconds.
 > >  >
 > >  > I'm not sure if this is related, but during the build, I got
 > >  > this message during "prepare:"
 > >  >
 > >  > Could not load definitions from resource
 > >  > emma_ant.properties. It could not be found.
 > >  >
 > >  > Does anybody have any ideas?
 > >  >
 > >  > Thanks,
 > >  > James
 > >



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