[ome-users] importer and insight do not login

Tue Dec 2 16:10:20 GMT 2008

Hi Brian,
I looked through the site and could not find the client version 3.1.1, only 3.1.2, which is now superseded by 3.2.  I don't know how quickly our server admin can upgrade to 3.2 on the server so can you send me a link to the client 3.1.1?

Thanks
Karl

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Today's Topics:

   1. Re: importer and insight do not login (Johnson, Karl)
   2. Again cannot connect to WebAdmin after 3.2 upgrade (Mario Valle)

----------------------------------------------------------------------

Message: 1
Date: Mon, 1 Dec 2008 08:40:17 -0700
From: "Johnson, Karl" <Karl_Johnson at nrel.gov>
Subject: Re: [ome-users] importer and insight do not login
To: Brian Loranger <brian.loranger at lifesci.dundee.ac.uk>, jean-marie
	<j.burel at dundee.ac.uk>
Cc: "Mahan, France" <France_Mahan at nrel.gov>,
	"ome-users at lists.openmicroscopy.org.uk"
	<ome-users at lists.openmicroscopy.org.uk>
Message-ID:
	<CAC2F9DC7B9B284A96A18CA324E259C3066E5B6803 at MAILBOX2.nrel.gov>
Content-Type: text/plain; charset="us-ascii"

Hi Brian and Jean-Marie,
Sorry I didn't get back to you last week, we had a holiday...

But here are the answers:
Ubuntu 8.04.1 is the server version
I am using the OMERO.importer and OMERO.insight version 3.1.2 and OMERO server version 3.1.1 (we started having this problem when we updated the server to 3.1.1 and clients to 3.1.2.)  Before that we were running 3.0.1 and had no problems logging in...

When I try to login I get:
The application failed to log in.  The hostname may be wrong or the server may be offline.

I am logged into the server via Putty so I know the server is up and running, I know the OMERO service is running and I have tried to stop/start the service so I know it is running.

Any good troubleshooting steps?

Thanks!
Karl

________________________________
From: Brian Loranger [mailto:brian.loranger at lifesci.dundee.ac.uk]
Sent: Thursday, November 27, 2008 4:27 AM
To: jean-marie
Cc: Johnson, Karl; ome-users at lists.openmicroscopy.org.uk
Subject: Re: [ome-users] importer and insight do not login

Hi Karl,

The error message you're getting sure sounds like an incompatibility between the client and server. Out of curiosity can you try and connect to the server using the exact same client version (so if you have a 3.1.1 server, try connecting to it with a 3.1.1 client).

Cheers,

Brian Loranger
Software Developer, Open Microscopy Environment
Division of Gene Regulation and Expression
University of Dundee
(The University of Dundee is a registered Scottish charity, No: SC015096)

On 27 Nov 2008, at 06:48, jean-marie wrote:

Hi Karl

Can you give us the client and server version you are using?
It seems that they don't match

Thanks

Jmarie

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Message: 2
Date: Tue, 02 Dec 2008 11:15:56 +0100
From: Mario Valle <mvalle at cscs.ch>
Subject: [ome-users] Again cannot connect to WebAdmin after 3.2
	upgrade
To: ome-users at lists.openmicroscopy.org.uk
Message-ID: <49350ADC.1060005 at cscs.ch>
Content-Type: text/plain; charset="iso-8859-1"

I just upgraded my OMERO installation from beta 3.1.1 to beta 3.2 on Mac OSX 10.4.
And again I cannot connect to WebAdmin.
Remember, last upgrade I was forced to wipe-out the database and reinstall everything from 
scratch. This time I want to avoid this...

So here the steps I followed, please check if I missed something essential.
1) Unpacked the kit to a new directory (/omero-Beta3.2)
2) Copied local.properties form the 3.1.1 installation to the 3.2 /etc directory
3) Started the server (under sudo):
#!/bin/sh
JBOSS_HOME=/omero-Beta3.2/jboss-4.2.3.GA
export JBOSS_HOME
$JBOSS_HOME/bin/run.sh >/tmp/omero.log 2>&1 &
4) Tried to connect to http://machine.cscs.ch:8080/WebAdmin
The error I receive is:

Connection failure: Error creating bean with name 'init' defined in class path resource 
[ome/client/spring.xml]: Cannot resolve reference to bean 'managed-ome.api.ISession' while 
setting bean property 'sessionService'; nested exception is 
org.springframework.beans.factory.BeanCreationException: Error creating bean with name 
'managed-ome.api.ISession': FactoryBean threw exception on object creation; nested 
exception is ome.client.OutOfService: Cannot initialize service proxy

5) Maybe I missed the deploy step...
So I executed java omero setup-db deploy, but obtain the following messages:

Buildfile: build.xml

prepare:
Created dir: /omero-Beta3.2/omero/target
Created dir: /omero-Beta3.2/omero/target/generated/.done
Created dir: /omero-Beta3.2/omero/target/generated/src
Created dir: /omero-Beta3.2/omero/target/generated/resources
Created dir: /omero-Beta3.2/omero/target/classes
Created dir: /omero-Beta3.2/omero/target/test-classes
Created dir: /omero-Beta3.2/omero/target/reports
Copying 1 file to /omero-Beta3.2/omero/target/generated/resources
Copying 1 file to /omero-Beta3.2/omero/target/classes
Copying 1 file to /omero-Beta3.2/omero/target/generated/resources
Copying 1 file to /omero-Beta3.2/omero/target/classes
Copying 1 file to /omero-Beta3.2/omero/target/generated/resources
Copying 1 file to /omero-Beta3.2/omero/target/classes
Copying 1 file to /omero-Beta3.2/omero/target/generated/resources
Copying 1 file to /omero-Beta3.2/omero/target/classes
Copying 1 file to /omero-Beta3.2/omero/target/generated/resources
Copying 1 file to /omero-Beta3.2/omero/target/classes
Could not load definitions from resource emma_ant.properties. It could not be found.

setup-db:
Copying 1 file to /omero-Beta3.2/omero/target
Copying 1 file to /omero-Beta3.2/omero/target
Copying 1 file to /omero-Beta3.2/omero/target
Executing file: /omero-Beta3.2/omero/target/ddl.sql
Failed to execute:   create table aberrationcorrection ( id int8 not null, permissions 
int8 not null, value varchar(255) not null unique, creation_id int8 not null, external_id 
int8 unique, group_id int8 not null, owner_id int8 not null, primary key (id) )

BUILD FAILED
/omero-Beta3.2/omero/components/antlib/resources/lifecycle.xml:69: 
org.postgresql.util.PSQLException: ERROR: relation "aberrationcorrection" already exists

Total time: 10 seconds

Help!

Attached the jboss logs, in case they can help diagnose the problem.

Thanks a lot!
		mario

-- 
Ing. Mario Valle
Data Analysis Group                              | http://www.cscs.ch/~mvalle
Swiss National Supercomputing Centre (CSCS)      | Tel:  +41 (91) 610.82.60
v. Cantonale Galleria 2, 6928 Manno, Switzerland | Fax:  +41 (91) 610.82.82
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