[ome-users] omero server installation

josh.moore at gmx.de josh.moore at gmx.de
Wed Aug 27 07:35:21 BST 2008


Harriett J Platero writes:
 > Hi Josh
 > when I go to : http://localhost:8080/WebAdmin and replace localhost 
 > with "Miguel", login as root, and the password omero, I get the message 
 > "Connection failure: Error creating bean with name 'init' defined in 
 > class path resource [ome/client/spring.xml]: Cannot resolve reference 
 > to bean 'managed:ome.api.ISession' while setting bean property 
 > 'sessionService'; nested exception is 
 > org.springframework.beans.factory.BeanCreationException: Error creating 
 > bean with name 'managed:ome.api.ISession': FactoryBean threw exception 
 > on object creation; nested exception is ome.client.OutOfService: Cannot 
 > initialize service proxy" 

This would seem to say that your server is not reachable, or "Out Of
Service".

 > I did notice that I so get the following error messages:
 > 
 > 1.  After the entering in "java omero setup-db deploy" I get the 
 > message "Exception in thread "main" java.lang.NoClassDefFoundError: 
 > omero
 > Caused by:  java.lang.ClassNotFoundException: omero
 >           at:  java.net.URLClassLoader$1.run(Unknown Source)
 >           at:  java.security.AccessController.doPriviledged(Native 
 > Method)
 >           at: java.net.URLClassLoader.findClass(Unknown Source)
 >           at:  java.lang.ClassLoader.loadClass(Unknown Source)
 >           at:  sun.misc.Launcher$AppClassLoader.loadClass(Unknown 
 > Source)
 >           at:  java.lang.ClassLoader.loadClass(Unknown Source)
 >           at:  java.lang.ClassLoader.loadClassInternal(Unknown Source)

This would probably be the reason for your other difficulties. Is your
CLASSPATH set? Try:

  set CLASSPATH

if so, you may need to unset it if the current directory is not
included:

  set CLASSPATH=

and then retry the command.

 > 2.  JAVA_HOME is not set.  Unexpected results may occur.  
 > Set JAVA_HOME to the directory of your local JDK to avoid this message.

Do you have the JDK or just the JRE installed? What's the value of:

  java -version

 > 3.  [AprLifecycleListener] The Apache Tomcat Native library which 
 > allows optimal performance in production environments was not found on 
 > the java.library.path:.....

You don't need to worry about this.

 > I've edited the local.properties file changing all instances of 
 > localhost to Miguel, then tried changing them all back to localhost, 
 > still get the same error messages.

If the "java omero setup-db deploy" command is failing, then your
server won't be able to start. We'll have to get that working first.

 > Hope you can help!

Me too! :)

 > Thanks
 > Harriett Platero

Cheers,
~Josh.

 > josh.moore at gmx.de wrote:
 > >
 > >Harriett J Platero writes:
 > > > Hello,
 > >
 > >Hi Harriet.
 > >
 > > > I'm attempting to install the omero server on a pc using the windows 
 > > > installation.
 > > > I'm not certain that the installation was successful.  After 
 > entering 
 > > > in run at the command prompt a lot of info appears ending with 
 > > > "14.45.00.634 INFO [Server] JBOSS (MX MicroKernal) [4.2.1.GA (build, 
 > > > SUNTag=JBOSS_4_2_1_GA date=200707131605)] started in 47s:522ms".
 > >
 > >Somewhere in all the output there should be a line of the form:
 > >
 > >  [ome.services.util.ServerVersionCheck] OMERO Version: 3.0-Beta3 
 > >
 > >which means that the OMERO server is ready. An easy test though is to
 > >browse to:
 > >
 > >  http://localhost:8080/WebAdmin
 > >
 > >(replacing "localhost" with the name of your server if
 > >necessary). There you should be able to login with "root" as your user
 > >name since there are no users on your system yet, and the password
 > >"omero".
 > >
 > >Then you can add users or groups as you need.
 > >
 > >After that, you can try logging into one of the clients (also from
 > >https://trac.openmicroscopy.org.uk/omero/wiki/MilestoneDownloads) with
 > >either the root user as above or with one of the users you've created.
 > >
 > >If that works, then you can start importing. If you haven't already
 > >watched them, the client videos are a good starting point:
 > >
 > >http://www.openmicroscopy.org/site/videos/videos-avi
 > >
 > > > Thank you
 > > > Harriett Platero
 > >
 > >Let us know how things fare.
 > >~Josh.
 > >



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