[ome-users] Matlab problems on Mac
Tom Macura
tm289 at cam.ac.uk
Mon Sep 24 02:08:59 BST 2007
Bernd,
You're using R2007b which we've never tried before. But it should
work....
Can you please give me the larger picture here? Are you trying to
configure OME in distributed mode with a master node and workers so
as to execute AnalysisChains comprised of MATLAB AnalysisModules? Or
are you trying to use OME simply in single-threaded mode?
If Distributed mode: the MATLAB user must be apache. If single-
threaded mode the MATLAB user must be your new-login.
Key point: Matlab_test_script.pl either works from the command-line,
or from curl, but not from both at the same time (unless both apache
and your user are licensed for MATLAB).
Please run sudo ome admin configure and see if the MATLAB user and
exec paths are right.
My output looks like this:
MATLAB Perl API configuration:
MATLAB User: macurato
MATLAB Path: /Applications/MATLAB73
MATLAB Exec: /Applications/MATLAB73/bin/matlab
MATLAB Exec Flags: -nodisplay -nojvm
Config MATLAB for dev?: yes
MATLAB .m files Path: /Users/macurato/Desktop/OME-Hacking/OME/
src/matlab
Sorry you're having troubles,
Tom
On Sep 23, 2007, at 7:39 PM, Bernd Jagla wrote:
> Hi again,
>
>
>
> I am experiencing some new Matlab problems and was wondering if
> anyone could help me with them:
>
>
>
> When executing the Matlab_test_script.pl script from the command
> line I get the expected result. When using curl I get an
>
> Internal error 2: Could not determine the path of the MATLAB root
> directory
>
>
>
> Original command path = /Applications/MATLAB_R2007b/bin/Matlab
>
> current command path = /Applications/MATLAB_R2007b/bin/Matlab
>
>
>
> …
>
>
>
> I believe I got everything to work with my old credentials and an
> older Matlab version. Since then I changed my login name,
> reinstalled Matlab.
>
> As can be seen from the command line Matlab is working. I also
> added a line in the Perl script:
>
> Print “current user” . getlogin() . “\n”;
>
>
>
> This returns “bernd”, i.e. the user that can execute the Matlab
> script from the command line.
>
>
>
> If anyone has an idea of what is going wrong again, please don’t
> hesitate to contact me…
>
>
>
> Thanks,
>
>
>
>
>
> Bernd
>
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