[ome-users] Retrieving original images from the server

[Curtis Rueden]

Hi Paulo,

> Is there a way to import the images in an Omero server with ImageJ?

The latest release of Bio-Formats has an updated "Download from OME"
plugin that can connect to an OMERO server as well as the OME 2.6.1
server. This is a preliminary implementation that has not been
thoroughly tested, but feel free to give it a try and send feedback if
you like. The "Upload to OME" plugin has not yet been updated, but
will be in a future release.

-Curtis

On Nov 28, 2007 1:12 PM, Curtis Rueden <ctrueden at wisc.edu> wrote:
> Hi Paolo,
>
> > Is there a way to import the images in an Omero server with ImageJ? If not,
> > are there plans to implement that, as in Ome (I tried the Loci plugin, which
> > gives me the option to import from Ome, but it did not work with the Omero
> > server). Or do you think the development of the Omero client will make that
> > unnecessary?
>
> We have plans to update the "Upload to OME" plugin to work with OMERO,
> but have not yet had time to do so. It is definitely something we will
> add in the future, though.
>
> > I have imported some .lif pictures into Omero and I am worried that
> > information (such as laser power, filters, etc) may be lost in the process.
> > Is there a way to easily retrieve (ie through the client) the original image
> > from the server? I have been looking around and couldn't find a way to do it.
> > (I saw the download icon when visualizing the image, but I couldn't get it to
> > work).
>
> I am not sure; one of the OMERO developers will have to comment on
> that. But that functionality is very important to my lab, so if it is
> not already there we will find a way to do it at some point.
>
> -Curtis
>
>
> On Nov 28, 2007 6:29 AM, Paulo Almeida <palmeida at igc.gulbenkian.pt> wrote:
> > Hi,
> >
> > Is there a way to import the images in an Omero server with ImageJ? If not,
> > are there plans to implement that, as in Ome (I tried the Loci plugin, which
> > gives me the option to import from Ome, but it did not work with the Omero
> > server). Or do you think the development of the Omero client will make that
> > unnecessary?
> >
> > I have imported some .lif pictures into Omero and I am worried that
> > information (such as laser power, filters, etc) may be lost in the process.
> > Is there a way to easily retrieve (ie through the client) the original image
> > from the server? I have been looking around and couldn't find a way to do it.
> > (I saw the download icon when visualizing the image, but I couldn't get it to
> > work).
> >
> >
> > Thank you,
> > - Paulo Almeida
> > _______________________________________________
> > ome-users mailing list
> > ome-users at lists.openmicroscopy.org.uk
> > http://lists.openmicroscopy.org.uk/mailman/listinfo/ome-users
> >
>