[ome-users] ome installs
Bernd Jagla
baj2107 at columbia.edu
Fri Jul 14 17:09:22 BST 2006
I removed everything, but still the same error:
Here is the output from BinaryBuild.log:
more /var/tmp/OME/install/BinaryBuilds.log
COMPILING MODULE -- 'make'
SUCCESS -- OUTPUT: "make -C cgrayce
make[1]: Entering directory `/home/bernd/allOMEs/ome-cvs/OME/src/C/cgrayce'
make[1]: Nothing to be done for `all'.
make[1]: Leaving directory `/home/bernd/allOMEs/ome-cvs/OME/src/C/cgrayce'
"
INSTALLING MODULE -- 'make install'
SUCCESS -- OUTPUT: "install -d /OME
install -d /OME/bin
install -d /OME/bin/findSpots
install -c findSpotsOME /OME/bin/findSpots/findSpotsOME
install -c findSpotsOME /OME/bin/findSpots/findSpots
install -d /OME/bin/BinarizeGlobal
install -c BinarizeGlobal /OME/bin/BinarizeGlobal/BinarizeGlobal
install -c DumpTIFFheader /OME/bin/DumpTIFFheader
install -c DumpTIFFstats /OME/bin/DumpTIFFstats
install -c OME_Image_XYZ_stats /OME/bin/OME_Image_XYZ_stats
install -c OME_Image_XYZ_fastStats /OME/bin/OME_Image_XYZ_fastStats
install -c OME_Image_XY_stats /OME/bin/OME_Image_XY_stats
install -c OME_Image_XY_sums /OME/bin/OME_Image_XY_sums
install -c SoftWorxSlice /OME/bin/SoftWorxSlice
install -c DumpSoftWorxHeader /OME/bin/DumpSoftWorxHeader
install -c DumpSoftWorxExHeader /OME/bin/DumpSoftWorxExHeader
install -c DumpSoftWorxStats /OME/bin/DumpSoftWorxStats
install -c maxIntensity /OME/bin/maxIntensity
install -d /usr/local/bin
install -c DumpDV /usr/local/bin/DumpDV
install -c SetDVwave /usr/local/bin/SetDVwave
make -C cgrayce install
make[1]: Entering directory `/home/bernd/allOMEs/ome-cvs/OME/src/C/cgrayce'
install -c ome_cccp /OME/bin/ome_cccp
install -c ome_tmcp /OME/bin/ome_tmcp
make[1]: Leaving directory `/home/bernd/allOMEs/ome-cvs/OME/src/C/cgrayce'
"
USING C CONFIGURE SCRIPT -- './configure --prefix=/OME
--with-omeis-root=/OME/OMEIS'
FAILURE -- OUTPUT: ""
============================================================================
If this is all getting too complicated I will be working on the new
version...
Thanks,
Bernd
|-----Original Message-----
|From: Tom Macura [mailto:tm289 at cam.ac.uk]
|Sent: Friday, July 14, 2006 11:37 AM
|To: Bernd Jagla
|Cc: 'OME users'
|Subject: Re: [ome-users] ome installs
|
|Bernd,
|
|You need to remove the "newer" version of OME -- drop the db- then install
|the "older one".
|
|So do "sudo ome admin uninstall -a" then try to reinstall.
|
|If things fail, please send the contents of the BinaryBuild.log.
|
|Tom
|
|On Jul 14, 2006, at 11:22 AM, Bernd Jagla wrote:
|
|
| Hello again my patient friends,
|
|
|
| I was successful installing the new CVS version of OME on my FC4.
Now
|I wanted to "load"/install an old version to just test some old importer
|features (probably a VERY bad idea.) Anyway, I was wondering what you guys
|make of this error message:
|
|
|
| -------------------
|
| Core Binary Setup
|
| -------------------
|
|
|
| (All verbose information logged in
|/var/tmp/OME/install/BinaryBuilds.log)
|
|
|
| Installing core binaries
|
| \_ Compiling [SUCCESS].
|
| \_ Installing [SUCCESS].
|
| Installing OMEIS
|
| \_ Configuring [FAILURE].
|
|
|
|
|
| Errors executing task: Unable to configure module, see
|BinaryBuilds.log for details. at (eval 35) line 1
|
|
|
| at install.pl line 80
|
| main::run_tasks() called at install.pl line 263
|
| [bernd at BERND-HOME OME-Jan06]$
|
|
|
|
|
| Maybe you have some text that I can read so I don't have to bother
|you too much,
|
|
|
| Thanks a lot,
|
|
|
| Bernd
|
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