[ome-users] shoola how to debug?

[Alastair Kerr]

thanks Jean-Marie but that was the 1st thing I changed. I've tried it
both with my ip number and the domain name (below)

   <services>
     <structuredEntry name="/services/OMEIS" type = "OMEIS">
      <url>http://wcbbioinf.icmb.ed.ac.uk/cgi-bin/omeis/</url>
     </structuredEntry>
     <structuredEntry name="/services/OMEDS" type = "OMEDS">
      <url>http://wcbbioinf.icmb.ed.ac.uk/shoola/"</url>
      </structuredEntry>
      

Anything look weird here?  I have a user: tester5 with pw: tester Works
ok with web page but not shoola.

Tested and failed with: 
JRE version on PC: latest
JRE version on Linux: 1.4

Could this be a closed port problem (if so what port should be open?) or
something to do with SOAP (during update I installed the latest from the
repository with no errors)? 

thanks 
Alastair






On Wed, 2005-04-27 at 12:16, Jean-Marie Burel wrote:
> Hi Alastair
> 
> I guess you didn't specify a proper url for OMEDS:
> open the config.xml file (in Shoola/config)
> then modify yourhost
> 
> <structuredEntry name="/services/OMEDS" type = "OMEDS">
> 
> <url>http://yourhost/shoola/"</url>
> 
> </structuredEntry>
> 
> it should work
> 
> ciao
> 
> jmarie
> 
> 
> 
> ----- Original Message ----- 
> From: "Alastair Kerr" <alastair.kerr at ed.ac.uk>
> To: "Ilya Goldberg" <igg at nih.gov>
> Cc: <ome-users at lists.openmicroscopy.org.uk>
> Sent: Wednesday, April 27, 2005 11:58 AM
> Subject: [ome-users] shoola how to debug?
> 
> 
> > Dear all,
> > with the new install I note that I can log in via the web interface ok
> > but with the java client (from either a PC or Linux) I cannot log in -
> > 'username or password is incorrect'. Any advice on debugging this?
> > thanks
> > - Alastair
> >
> >
> >
> >
> >
> >
> > On Wed, 2005-04-27 at 11:02, Alastair Kerr wrote:
> > > That worked first time, thanks again Ilya. Going through the web
> > > interface I noticed that the link for datasets gave the following error.
> > >
> > > >>>
> > > Error serving OME::Web::Search: Can't locate object method "/selector"
> > > via package "OME::Dataset" at
> > > /usr/lib/perl5/site_perl/5.8.3/OME/Web/DBObjRender.pm line 554.
> > > <<<<
> > >
> > >
> > > Nothing else obvious other than that
> > >
> > > cheers
> > > - Alastair
> > >
> > >
> > >
> > >
> > >
> > > On Tue, 2005-04-26 at 14:57, Ilya Goldberg wrote:
> > > > Running the installer with OME already installed will cause it to
> > > > automatically go into update mode.  Updates from the previous stable
> > > > release (2.2.1) have been tested on our systems.  Other update paths
> > > > should also work, but they have not all been tested.
> > > > In any case, make sure you have a backup of the database and your
> > > > installed OME version so that you can revert to what you have now.
> > > > Backup the database (use sudo or run it as root):
> > > > sudo ome admin data backup -q
> > > > If you need to restore,
> > > > sudo ome admin data restore ome-backup.tar.bz2
> > > > (or whatever you called your backup file if not ome-backup.tar.bz2)
> > > >
> > > > If you want to work with a stable release, you should check out the
> > > > OME_2_4_0 branch:
> > > > cvs -z3 -d ':pserver:anoncvs at cvs.openmicroscopy.org.uk:/ome' checkout
> > > > -r OME_2_4_0 OME
> > > > or download the release tarball:
> > > > http://cvs.openmicroscopy.org.uk/snapshots/stable.tar.gz
> > > >
> > > > Then, run install.pl as usual.
> > > > -Ilya
> > > >
> > > >
> > > > On Apr 26, 2005, at 9:15 AM, Alastair Kerr wrote:
> > > >
> > > > > Dear All,
> > > > > I've had a wee  look at the documentation and can't find an answer
> to
> > > > > this:  I am about to try to update to the latest version of OME. I
> have
> > > > > an older version installed (last June,- thanks again Ilya).
> > > > >
> > > > > I'd like to check whether a clean install would be advisable (if so
> how
> > > > > to 'make clean') or if an update should work ok I assume the update
> > > > > procedure would be to run a cvs update on the OME directory then
> rerun
> > > > > the install.pl script?
> > > > >
> > > > >
> > > > > thanks
> > > > > - Alastair
> > > > >
> > > > >
> > > > >
> > > > >
> > > > > -- 
> > > > > Alastair Kerr, Ph.D.,
> > > > > Bioinformatician, Wellcome Trust Centre for Cell Biology,
> > > > > COIL, Swann Building, The University of Edinburgh
> > > > > Edinburgh, EH9 3JR, UK
> > > > > Tel: 44-(0)131-650-7527
> > > > > _______________________________________________
> > > > > ome-users mailing list
> > > > > ome-users at lists.openmicroscopy.org.uk
> > > > > http://lists.openmicroscopy.org.uk/mailman/listinfo/ome-users
> > > > >
> > -- 
> > Alastair Kerr, Ph.D.,
> > Bioinformatician, Wellcome Trust Centre for Cell Biology,
> > COIL, Swann Building, The University of Edinburgh
> > Edinburgh, EH9 3JR, UK
> > Tel: 44-(0)131-650-7527
> > _______________________________________________
> > ome-users mailing list
> > ome-users at lists.openmicroscopy.org.uk
> > http://lists.openmicroscopy.org.uk/mailman/listinfo/ome-users
> >
-- 
Alastair Kerr, Ph.D., 
Bioinformatician, Wellcome Trust Centre for Cell Biology,
COIL, Swann Building, The University of Edinburgh
Edinburgh, EH9 3JR, UK
Tel: 44-(0)131-650-7527