[ome-devel] support on dm4 files

Abraham Cano abrahamcano76 at gmail.com
Thu Feb 8 23:15:46 GMT 2018


 The Gatan DM4 image I pretend to open should look like the following TIF
(both attached as Google Drive links) ​
 A----0018.tif
<https://drive.google.com/file/d/1Zciiq8QYZ27wyAwesjSx-AQdaS0B_ML8/view?usp=drive_web>
​​
 A----0018.dm4
<https://drive.google.com/file/d/1qUUccvYD3wyDeBH9DmWzTpYySpdqIZHK/view?usp=drive_web>
​

2018-02-08 16:29 GMT-06:00 Abraham Cano <abrahamcano76 at gmail.com>:

> Hi  David
>
> I have tried to open a DM4 file with Image J an Fiji, latest downloads, an
> also with the latest Bioformats package from here:
>
>
> http://www.openmicroscopy.org/bio-formats/downloads/
>
>
>
> After running bioformats_package.jar, I try to open any dm4 file and I can
> only see gray frames if setting first axis field to 30. Please see attached
> snapshots in BMP format; in this case setting axis field values to 1 led to
> the final snapshot.
>
> The current system is a Dell Optiplex 9020, Win 10 Enterprise, 64 bit, 4
> GB RAM, Intel Core i7-4770 @ 3.4 Ghz
>
> Many thanks in advance!
>
>
> Abraham
>
> 2018-02-08 5:27 GMT-06:00 David Gault (Staff) <d.gault at dundee.ac.uk>:
>
>> Hi Abraham,
>>
>> You should also be able to read DM4 files with Bio-Formats. Using the
>> latest Bio-Formats release with FIJI I was able to open the attached file
>> provided.
>> Which version of ImageJ and the Bio-Formats plugin are you using?
>>
>> Version information can be found in Help -> About Plugins -> Bio-Formats
>> Plugins
>>
>> With Thanks,
>> David Gault
>>
>> > On 8 Feb 2018, at 00:49, Abraham Cano <abrahamcano76 at gmail.com> wrote:
>> >
>> > Greetings
>> >
>> > Would you mind telling me if it is possible to open DM4 files?
>> > I have already installed Bioformat plugins withing Image J, but so far
>> it seems it only opens DM3 files.
>> >
>> > Many thanks in advance!
>> >
>> >
>> > Abraham Cano
>> > Materials Scientist
>> >
>> > <A----0014.dm4>_______________________________________________
>> > ome-devel mailing list
>> > ome-devel at lists.openmicroscopy.org.uk
>> > http://lists.openmicroscopy.org.uk/mailman/listinfo/ome-devel
>>
>>
>> The University of Dundee is a registered Scottish Charity, No: SC015096
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>
>
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