[ome-devel] SPW ome-tiffs & how to proceed?

Munro, Ian i.munro at imperial.ac.uk
Mon Aug 18 12:57:14 BST 2014


Thanks for the reply  Will

The final decision is down to the PIs I’m trying to gather information about our options.
Would it be easier to fix the download for this option than say having 1 big file for the whole plate?


Ian


On 18 Aug 2014, at 12:16, William Moore <will at lifesci.dundee.ac.uk> wrote:

> Hi Ian,
> 
> On 15 Aug 2014, at 15:24, "Munro, Ian" <i.munro at imperial.ac.uk> wrote:
>> 
>> 6)  Store data as ome-tiffs with no SPW xml but add this info in OMERO after import (either via dataset-to-plate script or the API)
>>       Estimated bloat. Unclear -ask OME team
>>       Pros. Might allow one file per FOV & work with future plate tools.
>>       Cons: Might not work - ask OME team
>>                 Big software effort and end of project is approaching rapidly.
>> 
> 
> If you are happy to try this approach, I should be able to fix web so that you can download
> the original files for selected wells, just as if you'd selected multiple images in a Dataset.
> 
> Of course, the images you download will have no SPW data associated with them,
> but if that's OK for you, then let's give this a try…
> 
> 
> Will.
> 
> 
>> 
>> 
>> 
>> 
>> 
>> 
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> 



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