[ome-devel] LaVision Imspector file formats

[Melissa Linkert]

Hi Ian,

> My colleague in Glasgow just uploaded some  examples of these files
> 
> to   http://qa.openmicroscopy.org.uk/qa/upload
> 
> The info he gave me was :
> 
> 
> Hi,
> 
> Just uploaded it there now. It is  QA Bug 4929 (new).
> 
> One is a TCSPC acquisition with 75 time bins, which Imspector the LaVision software wear sees as a 3-D x-y-time_bin stack. For the case of a z-stack TCSPC acquisition it sees it as a 4-D x-y-z-time_bin stack.
> 
> The other file is a three channel intensity z-stack (x-y-z) and again if it was a time course z-stack it would be a 4-D x-y-z-t stack.
> 
> Thank you very much for taking a look at this and if I can be of any more help please just let me know.

Thanks for this - we do have a ticket open:

https://trac.openmicroscopy.org.uk/ome/ticket/8071

I have CC'd both you and Ewan, so you will know as soon as we've added
support for this format.  There has been a lot of interest in this on
the mailing lists lately, and now that we have plenty of data I expect
that we should be able to have this working quite soon.

Regards,
-Melissa

On Thu, Feb 28, 2013 at 01:07:35PM +0000, Munro, Ian wrote:
> 
> My colleague in Glasgow just uploaded some  examples of these files
> 
> to   http://qa.openmicroscopy.org.uk/qa/upload
> 
> The info he gave me was :
> 
> 
> Hi,
> 
> Just uploaded it there now. It is  QA Bug 4929 (new).
> 
> One is a TCSPC acquisition with 75 time bins, which Imspector the LaVision software wear sees as a 3-D x-y-time_bin stack. For the case of a z-stack TCSPC acquisition it sees it as a 4-D x-y-z-time_bin stack.
> 
> The other file is a three channel intensity z-stack (x-y-z) and again if it was a time course z-stack it would be a 4-D x-y-z-t stack.
> 
> Thank you very much for taking a look at this and if I can be of any more help please just let me know.
> 
> Cheers,
> 
> Ewan
> 
> 
> 
> 
> 
> 
> On 28 Feb 2013, at 11:57,  wrote:
> 
> I just raised the subject of getting these files into bio-formats at a meeting in Dundee
> & the response was "send us the data".
> 
> So where/how could someone who has examples of these fies do this?
> 
> Regards
> 
> Ian
> 

> _______________________________________________
> ome-devel mailing list
> ome-devel at lists.openmicroscopy.org.uk
> http://lists.openmicroscopy.org.uk/mailman/listinfo/ome-devel