[ome-devel] time resolution
Rubén Muñoz
ruben.munoz at embl.de
Tue Nov 15 09:24:07 GMT 2011
Hi Melissa,
DeltaT was the actual info that we were looking for. Thanks for making possible to extract that for the ScanR microscope.
Best regards,
Rubén
On Nov 14, 2011, at 8:15 PM, Melissa Linkert wrote:
> Hi Rubén,
>
>> We have been using OME.TIF and OME.XML for quite a while and now we realize that cannot read the time resolution from existing datasets (also called time between cycles, or timeloop delay).
>>
>> Is this piece of information included in the OME XML specification? Where exactly?
>
> If I understand correctly, this is the "DeltaT" value on the "Plane" element.
>
>> For the ScanrReader importer the values are not being extracted. That info is the value 'timeloop delay' into the the experiment_descriptor.xml
>
> As of the latest trunk build, the value of "timeloop delay" will appear
> in the "DeltaT" attribute of "Plane". Note that the units are
> different: "timeloop delay" is in milliseconds, whereas DeltaT is in seconds.
>
> Regards,
> -Melissa
>
> On Mon, Nov 14, 2011 at 01:56:23PM +0100, Rubén Muñoz wrote:
>> Hello to all,
>>
>> We have been using OME.TIF and OME.XML for quite a while and now we realize that cannot read the time resolution from existing datasets (also called time between cycles, or timeloop delay).
>>
>> Is this piece of information included in the OME XML specification? Where exactly?
>>
>> For the ScanrReader importer the values are not being extracted. That info is the value 'timeloop delay' into the the experiment_descriptor.xml
>>
>> Thanks a lot for your work,
>>
>> Rubén
>>
>> _______________________________________________
>> ome-devel mailing list
>> ome-devel at lists.openmicroscopy.org.uk
>> http://lists.openmicroscopy.org.uk/mailman/listinfo/ome-devel
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