[ome-devel] loci_tools.jar 1280+ series limit?

[Rubén Muñoz]

Hi Melissa, 

Before going into debugging, I would like to ask you if you are concerned about a maximum number of series that the LOCI plugin of Fiji will handle. 

I am having trouble to open an ScanR with 4000+ series with a Fiji Macro. Well... this may not be the best idea but at the moment I convert to multi-file ome.tif this way. Any idea would be appreciated.

Please note that the set is converting with bfconvert. I could provide the set to to you on demand only because is really big.

java.lang.ArrayIndexOutOfBoundsException: 1280
	at loci.plugins.in.SeriesDialog.rebuildDialog(SeriesDialog.java:244)
	at loci.plugins.in.SeriesDialog.constructDialog(SeriesDialog.java:179)
	at loci.plugins.in.ImporterDialog.showDialog(ImporterDialog.java:79)
	at loci.plugins.in.ImporterPrompter.promptSeries(ImporterPrompter.java:138)
	at loci.plugins.in.ImporterPrompter.statusUpdated(ImporterPrompter.java:85)
	at loci.plugins.in.ImportProcess.notifyListeners(ImportProcess.java:377)
	at loci.plugins.in.ImportProcess.step(ImportProcess.java:618)
	at loci.plugins.in.ImportProcess.execute(ImportProcess.java:140)
	at loci.plugins.in.Importer.showDialogs(Importer.java:124)
	at loci.plugins.in.Importer.run(Importer.java:77)
	at loci.plugins.LociImporter.run(LociImporter.java:77)
	at ij.IJ.runUserPlugIn(IJ.java:189)
	at ij.IJ.runPlugIn(IJ.java:155)
	at ij.Executer.runCommand(Executer.java:147)
	at ij.Executer.run(Executer.java:78)
	at java.lang.Thread.run(Thread.java:637)

Best wishes,
Ruben