[ome-devel] Error on "Finalizing Database"
Andrew Ehrlich
andrew at dairysight.com
Wed Aug 4 13:13:43 BST 2004
I'm installing OME on a Gentoo platform. After installing all the Perl
modules and C libraries, install.pl ran as expected until the
"Finalizing Database" stage, where it returned:
---------------------
Finalizing Database
---------------------
Importing core XML
\__ /OME/src/xml/OMECoreTypes.ome [FAILURE].
Errors executing task: Error loading XML file
"/OME/src/xml/OMECoreTypes.ome", see CoreDatabaseTablesTask.log details.
at (eval 159) line 1
main::run_tasks() called at install.pl line 208
# Looks like your test died before it could output anything.
The log file reveals:
ERROR LOADING XML FILE "/home/andrew/omedl/OME/src/xml/OMECoreTypes.ome"
-- OUTPUT: "500 Not a SCALAR ref
erence
OME::Image::Server::__callOMEIS('OME::Image::Server', 'Method',
'UploadFile', 'File', '/home/andr
ew/omedl/OME/src/xml/OMECoreTypes.ome') called at
src/perl2/OME/Image/Server.pm line 1054
OME::Image::Server::uploadFile('OME::Image::Server',
'/home/andrew/omedl/OME/src/xml/OMECoreTypes
.ome') called at src/perl2/OME/Image/Server/File.pm line 112
OME::Image::Server::File::upload('OME::Image::Server::File',
'/home/andrew/omedl/OME/src/xml/OMEC
oreTypes.ome') called at src/perl2/OME/Tasks/OMEImport.pm line 146
OME::Tasks::OMEImport::importFile('OME::Tasks::OMEImport=HASH(0x929dff8)',
'/home/andrew/omedl/OM
E/src/xml/OMECoreTypes.ome', 'NoDuplicates', 1,
'IgnoreAlterTableErrors', 1) called at src/perl2/OME/Inst
all/CoreDatabaseTablesTask.pm line 614
eval {...} called at
src/perl2/OME/Install/CoreDatabaseTablesTask.pm line 613
OME::Install::CoreDatabaseTablesTask::load_xml_core('OME::Session=HASH(0x9284f54)',
'GLOB(0x8b905
88)') called at src/perl2/OME/Install/CoreDatabaseTablesTask.pm line 828
OME::Install::CoreDatabaseTablesTask::execute() called at (eval
159) line 1
eval 'OME::Install::CoreDatabaseTablesTask::execute()
;' called at install.pl line 81
main::run_tasks() called at install.pl line 208
"
Any ideas on fixing this?
Thanks for your help,
Andrew
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