[ome-users] omero cleanse failing

Olivier Miquel olivier.miquel at mri.cnrs.fr
Wed Feb 14 08:56:34 GMT 2018


Hi Josh,

Your workaround just worked fine.

Due to the bug mentioned below i never succeeded to run omero cleanse on 
our file system since years.
So a large amount of unneeded and empty dir was lying here.

With the keep-alive options enabled, the script takes 8 hours to scan 
25T of data and it had removed more than 50k empty dirs.

Now that i could run it, i will put it into a nice cron job,

Thanks you,
O.



On 12/02/2018 21:51, Josh Moore wrote:
> Hi Olivier
>
> On Mon, Feb 12, 2018 at 6:01 PM, Olivier Miquel
> <olivier.miquel at mri.cnrs.fr> wrote:
>> I'm trying to clean our filesystem and our omero database.
>> After about one hour or two hours of execution, the process doesn't seems to
>> suceed.
>>
>> It may be related to this bug :
>> http://trac.openmicroscopy.org/ome/ticket/13225
> It's not exactly the same issue but likely related. If you'd like, you
> can send your server log and we can investigate further.
>
> To workaround the issue, you can try to use:
>
>    bin/omero sessions keepalive
>
> in one shell, and then run cleanse from another shell.
>
> Could you tell us what you are looking to cleanse from the system? Is
> this largely an issue of the empty directories or of some dangling
> data?
>
> Cheers,
> ~Josh
> _______________________________________________
> ome-users mailing list
> ome-users at lists.openmicroscopy.org.uk
> http://lists.openmicroscopy.org.uk/mailman/listinfo/ome-users


-- 
Olivier Miquel
Administrateur Système et Réseau
Plate-forme technologique MRI
Tel : 06.50.19.27.43
Mail:olivier.miquel at mri.cnrs.fr



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