[ome-users] Axioscan czi opens cropped in Fiji

[Kai Schleicher]

Hi Balaji,

thanks for your reply and creating the card!

I'll follow it and keep me updated.

Thanks and have a nice Sunday,
Kai


On 11/10/2017 06:30 PM, Balaji Ramalingam (Staff) wrote:
>
> Dear Kai,
>
> Thank you for sharing your issue and the file associated with the same.
>
> There seems to be an issue with reading the dimensions appropriately 
> in this file and I have created a card on this front,
>
> https://trello.com/c/n6KSnhed/198-axioscan-czi-file-dimensions-issue
>
> This will get reviewed at the earliest.
>
> Please follow the card to get more updates on the same.
>
> Hope that helps.
>
> Best,
>
> Balaji
>
> *From: *ome-users <ome-users-bounces at lists.openmicroscopy.org.uk> on 
> behalf of Kai Schleicher <kai.schleicher at unibas.ch>
> *Reply-To: *OME User Support List <ome-users at lists.openmicroscopy.org.uk>
> *Date: *Thursday, 9 November 2017 at 13:56
> *To: *"ome-users at lists.openmicroscopy.org.uk" 
> <ome-users at lists.openmicroscopy.org.uk>
> *Subject: *[ome-users] Axioscan czi opens cropped in Fiji
>
> Dear OME-team,
>
> A user of ours has encountered a curious problem when working with his 
> *.czi files 
> <https://filesender.switch.ch/filesender/?vid=7989119a-b2e4-ef49-8b2b-00005705c75a> 
> generate by the Zeiss Axioscan Slidscanner.
>
> In Brief, the images Open fine in Zen 2 and are complete. They do also 
> open in the latest Fiji, but appear to be cropped (see screenshot 
> attached).
>
> Do you have an idea what could have happened here?
>
> As always, thanks for your support and greetings from Basel,
> Kai
>
> -- 
> >>Please note my NEW PHONE NUMBERS: +41 61 207 57 31 (direct) +41 61 207 22 50 (central)<<
> Kai Schleicher, PhD | Research Associate in Advanced Light Microscopy | Biozentrum, University of Basel | Klingelbergstrasse 50/70 | CH-4056 Basel |
> Phone: +41 61 207 57 31 (direct) +41 61 207 22 50 (central) |kai.schleicher at unibas.ch <mailto:kai.schleicher at unibas.ch>  |www.biozentrum.unibas.ch <http://www.biozentrum.unibas.ch>  |www.microscopynetwork.unibas.ch <http://www.microscopynetwork.unibas.ch>
>
> The University of Dundee is a registered Scottish Charity, No: SC015096
>
>
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-- 
>> Please note my NEW PHONE NUMBERS: +41 61 207 57 31 (direct) +41 61 207 22 50 (central)<<
Kai Schleicher, PhD | Research Associate in Advanced Light Microscopy | Biozentrum, University of Basel | Klingelbergstrasse 50/70 | CH-4056 Basel |
Phone: +41 61 207 57 31 (direct) +41 61 207 22 50 (central) | kai.schleicher at unibas.ch | www.biozentrum.unibas.ch | www.microscopynetwork.unibas.ch

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