[ome-users] BioFormats Macro Extensions Problem with Ext.openImage(title, no)

[Balaji Ramalingam]

Hi Oliver,

There seems to be a signature error,

Here's a small Macro that works for me,


run("Bio-Formats Macro Extensions");

id = File.openDialog("Choose a file");

Ext.setId(id);

Ext.getImageCount(imageCount);

for (image=0; image<imageCount; image++) {

Ext.openImage("", image);

}

Ext.close();

For more details on the macro-extensions,
https://www.openmicroscopy.org/site/support/bio-formats5/users/imagej/#macros-and-plugins

And I got the above suggestion from an earlier forum post,
http://www.openmicroscopy.org/community/viewtopic.php?f=13&t=2400

Hope this helps.

Best,
Balaji

__________________

Mr Balaji Ramalingam

Software Developer

OME Team

College of Life Sciences

University of Dundee

From: Burri Olivier <olivier.burri at epfl.ch<mailto:olivier.burri at epfl.ch>>
Date: Tuesday, 29 July 2014 14:31
To: "ome-users at lists.openmicroscopy.org.uk<mailto:ome-users at lists.openmicroscopy.org.uk>" <ome-users at lists.openmicroscopy.org.uk<mailto:ome-users at lists.openmicroscopy.org.uk>>
Subject: [ome-users] BioFormats Macro Extensions Problem with Ext.openImage(title, no)

Hi,

When running the BioFormats Macro extensions,

After initializing the image and setting the series
Ext.setId(id);
Ext.setSeries(seriesNum);

If I run something like
Ext.openImage("My Image", 0);

I get the following error dialog:
« Macro Error »
Function name expected : in line  ##.
Ext.<openImage>("My Image", 0);

If I replace the call to Ext.openImage with Ext.openSubImage

And make sure to get the X and Y sizes of the image before, this works just fine.

Ext.openSubImage("My Image", 0,0,0,sizeX,sizeY);

Any thoughts?

Thank you and best regards
Oli

Olivier Burri
Engineer - Image Processing
& Software Development
EPFL - SV - PTECH - BIOP


The University of Dundee is a registered Scottish Charity, No: SC015096
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