[ome-users] (no subject)

[Melissa Linkert]

Hi Mario,

> I'm trying to read comment fields from a lossless compressed JPEG200
> file, created with Matlab (R2011b, in case it matters). Matlab supports
> setting a list of arbitrary comments in the file, by specifying a cell
> array of strings as a parameter to imwrite().
> See http://www.mathworks.ch/help/techdoc/ref/imwrite.html#bsfqp3l-1.
> 
> I'll send a corresponding image in a separate email. Is it possible
> to read the comment fields with BioFormats?

Thank you for mentioning this, and for sending a file privately.

This commit allows the comments to be read and stored in Bio-Formats'
original metadata hashtable:

https://github.com/melissalinkert/bioformats/commit/eed5a864fb928511a84f9ec48376639b4431b49e

A new development build with that fix should be available within a few
days, otherwise the upcoming 4.4.3 version of Bio-Formats will include
this fix.

Regards,
-Melissa

On Mon, Aug 27, 2012 at 01:54:09PM +0200, Mario Emmenlauer wrote:
> 
> Dear OME Developers,
> 
> I'm trying to read comment fields from a lossless compressed JPEG200
> file, created with Matlab (R2011b, in case it matters). Matlab supports
> setting a list of arbitrary comments in the file, by specifying a cell
> array of strings as a parameter to imwrite().
> See http://www.mathworks.ch/help/techdoc/ref/imwrite.html#bsfqp3l-1.
> 
> I'll send a corresponding image in a separate email. Is it possible
> to read the comment fields with BioFormats?
> 
> Thanks and all the best,
> 
>    Mario
> 
> 
> 
> 
> -- 
> Mario Emmenlauer, Dipl.Inf.                  Office: +41-(0)61-26-72200
> Biozentrum Basel
> Klingelbergstrasse 50/70           mailto: mario.emmenlauer * unibas.ch
> CH-4056 Basel                     http://infectx.org/about_us/emmenlau/
> 
> 
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