[ome-users] FYI warnings and small things on OSX

Mario Valle mvalle at cscs.ch
Tue Mar 31 10:40:13 BST 2009


Congratulation for 4.0! OMERO installed without problems on OSX 10.4

Now we started testing, so here is the first "small problems" report :-)
Below you find some warning from running build.py (we have Python 2.6.1).
Attached a screenshot of insight. You see, the two image icons overlap.
Also in the build instructions (I'm still using the ones from the mail) add that
PYTHONPATH should be defined before running bin/omero to:
PYTHONPATH={blabla}/Ice-3.3.0/py/python:{blabla}/omero-4.0/dist/lib/python

Hope it helps
			mario


/omero-4.0/components/server/src/ome/security/basic/EventHandler.java:94: warning: 
[deprecation] connection() in org.hibernate.Session has been deprecated
         Statement statement = session.connection().createStatement();
                                      ^
/omero-4.0/components/server/src/ome/services/fulltext/FullTextIndexer.java:125: warning: 
[deprecation] connection() in org.hibernate.Session has been deprecated
                 Statement s = session.connection().createStatement();
                                      ^
/omero-4.0/components/server/src/ome/tools/spring/ManualFlushHibernateTemplate.java:21: 
warning: [deprecation] saveOrUpdateAll(java.util.Collection) in 
org.springframework.orm.hibernate3.HibernateOperations has been deprecated
public class ManualFlushHibernateTemplate extends HibernateTemplate {
        ^
Note: Some input files use unchecked or unsafe operations.
Note: Recompile with -Xlint:unchecked for details.
3 warnings


/omero-4.0/target/scons/scons-local-1.1.0/SCons/Platform/posix.py:38: DeprecationWarning: 
The popen2 module is deprecated.  Use the subprocess module.
   import popen2
/omero-4.0/target/scons/scons-local-1.1.0/SCons/Tool/msvs.py:37: DeprecationWarning: the 
md5 module is deprecated; use hashlib instead
   import md5

/omero-4.0/components/blitz/resources/omero/Internal.ice:1: warning: Converted [CR+LF] to 
[LF]


/omero-4.0/components/blitz/generated/omero/api/_ServiceFactoryTie.java:80: warning: 
[deprecation] close(Ice.Current) in omero.api._ServiceFactoryOperations has been deprecated
     close(Ice.Current __current)
     ^
/omero-4.0/components/blitz/generated/omero/api/_ServiceFactoryTie.java:82: warning: 
[deprecation] close(Ice.Current) in omero.api._ServiceFactoryOperations has been deprecated
         _ice_delegate.close(__current);
                      ^
Note: Some input files use unchecked or unsafe operations.
Note: Recompile with -Xlint:unchecked for details.
2 warnings

/omero-4.0/components/tools/OmeroImporter/src/ch/randelshofer/quaqua/jaguar/filechooser/QuaquaJaguarFileChooserPanel.java:51: 
warning: [deprecation] show() in java.awt.Dialog has been deprecated
         d.show();
          ^
/omero-4.0/components/tools/OmeroImporter/src/ch/randelshofer/quaqua/panther/QuaquaPantherFileChooserUI.java:1872: 
warning: [deprecation] show() in java.awt.Dialog has been deprecated
             dialog.show();
                   ^
Note: Some input files use unchecked or unsafe operations.
Note: Recompile with -Xlint:unchecked for details.
2 warnings


-- 
Ing. Mario Valle
Data Analysis and Visualization Group            | http://www.cscs.ch/~mvalle
Swiss National Supercomputing Centre (CSCS)      | Tel:  +41 (91) 610.82.60
v. Cantonale Galleria 2, 6928 Manno, Switzerland | Fax:  +41 (91) 610.82.82
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