[ome-devel] Developer release of OMERO & Bio-Formats 5.1.0-m2

Helen Flynn (Staff) h.flynn at dundee.ac.uk
Thu Dec 4 16:52:24 GMT 2014


Dear All,

Today we have made OMERO and Bio-Formats version 5.1.0-m2 public, see http://downloads.openmicroscopy.org/omero/5.1.0-m2/
and
http://downloads.openmicroscopy.org/bio-formats/5.1.0-m2/

This is the second of three development milestones that we're releasing in the lead up to 5.1.0. It is intended as a preview of the major and ongoing API and model changes. The code is definitely use at your own risk and is only intended as a developer preview to help you update your code before the final release Q1/2015.

Model changes:

  *   units support, meaning units now have real enums
  *   minor fixes for model changes introduced in m1

The units changes mean that the following fields have changed:


  *   Plane.PositionX, Y, Z; Plane.DeltaT; Plane.ExposureTime
  *   Shape.StrokeWidth; Shape.FontSize
  *   DetectorSettings.Voltage; DetectorSettings.ReadOutRate
  *   ImagingEnvironment.Temperature; ImagingEnvironment.AirPressure
  *   LightSourceSettings.Wavelength
  *   Plate.WellOriginX, Y
  *   Objective.WorkingDistance
  *   Pixels.PhysicalSizeX, Y, Z; Pixels.TimeIncrement
  *   StageLabel.X, Y, Z
  *   LightSource.Power
  *   Detector.Voltage
  *   WellSample.PositionX, Y
  *   Channel.EmissionWavelength; Channel.PinholeSize;
  *   Channel.ExcitationWavelength
  *   TransmittanceRange.CutOutTolerance; TransmittanceRange.CutInTolerance;
  *   TransmittanceRange.CutOut; TransmittanceRange.CutIn
  *   Laser.RepetitionRate; Laser.Wavelength


Other changes that we've made that may affect developers include:

  *
  *   ongoing C++ implementation improvements
  *   ongoing work to add unit support in OMERO.insight
  *   further flake8 work
  *   removal of webtest app from OMERO.web to a separate repository
  *   Blitz gateway fixes
  *   CLI fixes
  *   ROI and tables work

Further changes are planned in milestone 3 (see https://trac.openmicroscopy.org.uk/ome/milestone/5.1.0-m3) so the API and Model should not be considered stable at this stage. Also note that the changes are not fully documented as yet.

Regards,

The OME Team

Dr Helen Flynn
OME Technical Writer
Centre for Gene Regulation & Expression
Open Microscopy Environment
University of Dundee
http://openmicroscopy.org<http://openmicroscopy.org/>


The University of Dundee is a registered Scottish Charity, No: SC015096
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