[ome-users] Multiple groups "in-place import"?

Kölble, Konrad Konrad.Koelble at uk-erlangen.de
Thu Jan 31 14:20:39 GMT 2019


Hi,
Josh's suggestion
https://raw.githubusercontent.com/ome/training-scripts/master/maintenance/scripts/in_place_import_as.sh
...
 FOLDER=${FOLDER:-siRNAi-HeLa}
 NUMBER=${NUMBER:-40}
 OMEUSER=${OMEUSER:-user}
 DATATYPE=${DATATYPE:-dataset}
 for ((i=1;i<=$NUMBER;i++));
 do  $OMEROPATH login --sudo ${SUDOER} -u $OMEUSER-$i -s $HOST -w $PASSWORD
     if [ "$DATATYPE" = "dataset" ]; then
         DatasetId=$($OMEROPATH obj new Dataset name=$FOLDER)
         $OMEROPATH import -d $DatasetId --transfer=ln_s "/OMERO/in-place-import/$FOLDER"
     elif [ "$DATATYPE" = "plate" ]; then
         $OMEROPATH import --transfer=ln_s "/OMERO/in-place-import/$FOLDER"
     fi
...
imports datasets into folders for N users.

Could one adapt this to import a more complex multi-project structure into N groups(=participants/users) keeping the Dataset Details contained?

Cheers
Konrad


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