[ome-users] ICS/IDS opening error

[David Gault (Staff)]

Hi Laurent,

Thank you for reporting the issue. I have been able to reproduce the issue using the file you provided.
This appears to occur when attempting to construct the slice label for display, there is a special character ($) in the file path which is not being handled correctly.
I have opened a Bio-Formats Trello card for this problem:
https://trello.com/c/FFph0em5/309-imageplusreader-handle-special-chars-in-slice-label

In the meantime if you need a workaround you can change the pattern for the slice label in :
Plugins -> Bio-Formats -> Bio-Formats Plugins Configuration -> Slice Label Pattern

Removing the %n from the pattern will allow the file to be opened as normal.

With Thanks,
David Gault

On 15 Jan 2019, at 10:19, Laurent Guerard <laurent.guerard at unibas.ch<mailto:laurent.guerard at unibas.ch>> wrote:

UPDATE : This error happened while saving through the GUI but didn't happen when using the macro language. I guess something must have failed when doing it through the GUI but shouldn't happen again.

Thanks anyway :)

On 14/01/2019 17:40, Laurent Guerard wrote:
Hi all,

First of all, happy new year to all the team and members of the list ! :)

Now with the bad news, I worked over the week end on some 50Gb images and since it's way faster to save as ICS/IDS I decided to export them that way. Now, when I want to open it I get an 'Illegal Group reference' issue as you can see on that image.

<bgajflbdhkkaicem.png>

The smallest file I have is around 8Gb and can be found here<https://drive.switch.ch/index.php/s/t5yvGxeoz8xvwmy>.

Do you know where this might come from ?

Thanks a lot.

Best,
Laurent






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