[ome-users] Spinning disk images as mvd2 files, handling of special characters

[Sascha Neinert]

Hi Melissa,

the big file is on it’s way, there is a small image set attached to this mail as well that causes the same behaviour.

Best regards, Sascha 

--
Sascha Neinert
CECAD RRZK IT Service
Regional Computing Center (RRZK)
University of Cologne
Phone: +49-221 478-84051 / +49-221 470-89624
Mail: sascha.neinert at uni-koeln.de





> On 22. Feb 2019, at 18:01, Melissa Linkert <melissa at glencoesoftware.com> wrote:
> 
> Hi Sascha,
> 
> Thank you for reporting this problem.  I have sent instructions for
> uploading large files to the OME team in a private email.
> 
> Regards,
> -Melissa
> 
> On Fri, Feb 22, 2019 at 8:43 AM Sascha Neinert
> <sascha.neinert at uni-koeln.de> wrote:
>> 
>> Dear all,
>> 
>> we uploaded an image in mvd2 format (volocity, from PerkinElmer) to an OMERO 5.4.10 server using bio-formats 5.9.2. The resulting image in OMERO gets a name like this (short and concise...):
>> 
>> 140620_3_TPK030xBInRDNECadRFP_InRDNclon_30min38°C_incubation48h25°C_60xw_40%.mvd2 [140620_1_TPK030xBInRDNECadRFP_InRDNclon_30min38�C_incubation48h25�C_60xw_40% 2/XY point 11]
>> 
>> The special character ° (degree sign) from the filename is not modified, but the name of the sub image in square brackets also contains a ° that results into a � (like a question mark). The image name looks the same both in OMERO.web and in OMERO.insight. We did not see this behaviour when uploading the same image to an OMERO 5.4.5 server using bio-formats 5.7.3.
>> 
>> I don’t know if this is from something in the underlying linux or if this could have something to do with the last upgrade we did. I have an image that i could upload somewhere that causes this, but the only one i have has 56 GB unfortunately.
>> 
>> Best regards, Sascha
>> 
>> 
>> --
>> Sascha Neinert
>> CECAD RRZK IT Service
>> Regional Computing Center (RRZK)
>> University of Cologne
>> Phone: +49-221 478-84051 / +49-221 470-89624
>> Mail: sascha.neinert at uni-koeln.de
>> 
>> 
>> 
>> 
>> 
>> 
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>> ome-users mailing list
>> ome-users at lists.openmicroscopy.org.uk
>> http://lists.openmicroscopy.org.uk/mailman/listinfo/ome-users
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