[ome-users] ome-users Digest, Vol 159, Issue 9

[David Gault (Staff)]

Hi Wendy,

Thank you for uploading the sample dataset. I was able to test and reproduce the issue as you had reported. Thankfully it appears that although the display name in the titlebar is incorrect the datasets themselves are being read and parsed as expected. The issue should also not be present in datasets which do not contain an underscore character in the filename of the nd file.

This is however still a bug and as such I have opened a Trello card on the Bio-Formats inbox to track this issue - https://trello.com/c/823WSGPH/247-metamorph-incorrect-image-name-in-title-bar

With Thanks,
David Gault

On 20 Jun 2018, at 16:05, Wendy Salmon <wsalmon at WI.MIT.EDU<mailto:wsalmon at WI.MIT.EDU>> wrote:

David,
I uploaded a set of three file sets.  Note that the images are all blank--nothing pretty to look at (they were the first database I came across).

When I opened set "..._3.nd", the window showed the name for the first .tif in the folder. When looking at the Image Information, it has the title from the first tif in the folder but the correct path for the .nd file.

Thanks!
Wendy

Date: Tue, 19 Jun 2018 11:37:39 +0000
From: "David Gault (Staff)" <d.gault at dundee.ac.uk<mailto:d.gault at dundee.ac.uk>>
To: OME User Support List <ome-users at lists.openmicroscopy.org.uk<mailto:ome-users at lists.openmicroscopy.org.uk>>
Subject: Re: [ome-users] Incorrect image window names with MetaMorph
        .nd     files
Message-ID: <78E7B2B0-A9C6-41FA-9F07-BB67AC5E9AA6 at dundee.ac.uk<mailto:78E7B2B0-A9C6-41FA-9F07-BB67AC5E9AA6 at dundee.ac.uk>>
Content-Type: text/plain; charset="us-ascii"

Hi Wendy,

Thank you for getting in touch, is it only the name on the image window which appears incorrect or has the import used additional files from the other dataset ? If you have some sample datasets that reproduce this problem it would be very helpful. You can upload them to https://www.openmicroscopy.org/qa2/qa/upload/

With Thanks,
David Gault

On 18 Jun 2018, at 19:17, Wendy Salmon <wsalmon at WI.MIT.EDU<mailto:wsalmon at WI.MIT.EDU><mailto:wsalmon at WI.MIT.EDU<mailto:wsalmon at WI.MIT.EDU>>> wrote:

Hello,

My users and I are experiencing a strange problem when opening MetaMorph .nd files.  If there are multiple .nd data sets in a folder, the image window shows the name of the first .nd file from the folder rather than the actual file that was opened.  I am happy to provide some datasets if necessary.

Best,
Wendy

--------------------
Wendy C Salmon, M.A.
Light Microscopy Specialist
W.M. Keck Facility for Biological Imaging
Whitehead Institute for Biomedical Research
455 Main St., Rm 447
Cambridge, MA 02142
e: wsalmon at wi.mit.edu<mailto:wsalmon at wi.mit.edu><mailto:wsalmon at wi.mit.edu<mailto:wsalmon at wi.mit.edu>>
c: 617-429-0158
w: microscopy.wi.mit.edu<http://microscopy.wi.mit.edu/><http://microscopy.wi.mit.edu/>
_______________________________________________
ome-users mailing list
ome-users at lists.openmicroscopy.org.uk<mailto:ome-users at lists.openmicroscopy.org.uk><mailto:ome-users at lists.openmicroscopy.org.uk<mailto:ome-users at lists.openmicroscopy.org.uk>>
http://lists.openmicroscopy.org.uk/mailman/listinfo/ome-users


The University of Dundee is a registered Scottish Charity, No: SC015096


_______________________________________________
ome-users mailing list
ome-users at lists.openmicroscopy.org.uk<mailto:ome-users at lists.openmicroscopy.org.uk>
http://lists.openmicroscopy.org.uk/mailman/listinfo/ome-users


The University of Dundee is a registered Scottish Charity, No: SC015096
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://lists.openmicroscopy.org.uk/pipermail/ome-users/attachments/20180621/9abbc252/attachment.html>