[ome-users] Bug report: Cannot open jp2 file created by StereoInvestigator

[Sebastien Besson (Staff)]

Hi Kouichi,

thanks for the list, we were able to reproduce the issue with MATLAB R2017b using
the same set of toolboxes as the one you reported.

>From our investigation, the Text Analytics Toolbox is the one which shipps the
conflicting JAR. After uninstalling the toolbox via `Manage add-ons` in MATLAB and
restarting MATLAB, the initial error seems to be resolved when opening the jp2 file.

We will amend our documentation page to highlight this current limitation for the next
Bio-Format patch release.

Best,
Sebastien

> On 31 Oct 2017, at 11:51, Kouichi C. Nakamura <kouichi.c.nakamura at gmail.com> wrote:
>
> Hi Sebastian,
>
> Almost certainly "MATLAB" itself or "Image Processing Toolbox", I suppose, for I've only installed the following Toolboxes.
>
>
> >> ver
> -----------------------------------------------------------------------------------------------------
> MATLAB Version: 9.3.0.713579 (R2017b)
> MATLAB License Number: 972477
> Operating System: Microsoft Windows 7 Professional Version 6.1 (Build 7601: Service Pack 1)
> Java Version: Java 1.8.0_121-b13 with Oracle Corporation Java HotSpot(TM) 64-Bit Server VM mixed mode
> -----------------------------------------------------------------------------------------------------
> MATLAB Version 9.3         (R2017b)
> Curve Fitting Toolbox Version 3.5.6       (R2017b)
> Image Processing Toolbox Version 10.1        (R2017b)
> NeuroSpec Version 2.0
> Parallel Computing Toolbox Version 6.11        (R2017b)
> Signal Processing Toolbox Version 7.5         (R2017b)
> Spreadsheet Link Version 3.3.2       (R2017b)
> Statistics and Machine Learning Toolbox Version 11.2        (R2017b)
> Text Analytics Toolbox Version 1.0         (R2017b)
> Wavelet Toolbox Version 4.19        (R2017b)
>
>
> Best,
>
> Kouichi
>
> --
> Kouichi C. Nakamura, PhD
> Senior Postdoctoral Neuroscientist
> MRC Brain Network Dynamics Unit
> University of Oxford
> Mansfield Road, Oxford OX1 3TH, United Kingdom
> +44-1865-271582 (office)
> http://www.mrcbndu.ox.ac.uk/people/dr-kouichi-c-nakamura
> kouichi.c.nakamura at gmail.com
> kouichi.nakamura at pharm.ox.ac.uk
>
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