[ome-users] Micro-Manager datasets can't be opened anymore

Thomas Julou thomas.julou at normalesup.org
Mon Jul 10 14:01:32 BST 2017


Hi Sebastien,

Thanks for the hint!
I ended up not finding another way than reinstalling fiji and all plugins. but it seems to work now.
Best,

Thomas


> On 10 Jul 2017, at 13:00, ome-users-request at lists.openmicroscopy.org.uk wrote:
> 
> Hi Thomas,
> 
> I think you are encountering the issue reported in [1].
> 
> The formats-common component has been decoupled, renamed as ome-common and
> supplemented with new methods in Bio-Formats 5.3.0. However, the old formats-common
> JAR is still shipped via the Fiji update site and seems to conflict with the newer JAR shipped
> via the Java-8 update site.
> 
> A workaround is to uninstall formats-common.jar locally [2]. There is still some discussion
> on the preferable way to resolve this generically which probably involve work on the various
> update sites.
> 
> Best,
> Sebastien
> 
> [1] http://forum.imagej.net/t/fiji-and-bioformats-conflicting-jars/5736 <http://forum.imagej.net/t/fiji-and-bioformats-conflicting-jars/5736>
> [2] http://forum.imagej.net/t/fiji-and-bioformats-conflicting-jars/5736/3 <http://forum.imagej.net/t/fiji-and-bioformats-conflicting-jars/5736/3>

-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://lists.openmicroscopy.org.uk/pipermail/ome-users/attachments/20170710/8e7f31bc/attachment.html>


More information about the ome-users mailing list