[ome-users] ERROR: Could not import omero.cli! (/opt/Ice-3.5.1/python/IcePy.so: undefined symbol: PyUnicodeUCS4_AsUTF8String

Karen M. Fernsler kmfernsler at lbl.gov
Thu Mar 24 00:34:58 GMT 2016


Hi, 

I'm a bit stuck installing OMERO (5.2) here on Centos 6.5, python 2.7.11 and Ice 3.5.1 (we're also stuck at this revision of the OS at the moment).  I've been following http://www.openmicroscopy.org/site/support/omero5.2/sysadmins/unix/server-centos6.html, and made it to the "Install OMERO.server" section.  When executing:

"OMERO.server/bin/omero config set omero.data.dir "$OMERO_DATA_DIR",  the output is:

********************************************************************************

        ERROR: Could not import omero.cli! (/opt/Ice-3.5.1/python/IcePy.so: undefined symbol: PyUnicodeUCS4_AsUTF8String)

        This means that your installation is incomplete. Contact
        the OME mailing lists for more information:

        http://www.openmicroscopy.org/site/community

        If you are building from source, please supply the build log
        as well as which version you are building from. If you
        downloaded a distribution, please provide which link you
        used.
        
********************************************************************************

        Debugging Info:
        --------------
        CWD=/home/omero
        VERSION=2.7.11 (default, Mar 23 2016, 15:43:16)  [GCC 4.4.7 20120313 (Red Hat 4.4.7-4)]
        OMERO_HOME=None
        PYTHONPATH=['/home/omero/OMERO.server/lib/python', '/home/omero/OMERO.server/var/lib', '/home/omero/OMERO.server-5.2.2-ice35-b17/bin', '/opt/Ice-3.5.1/python', '/home/omero', '/home/omero/omeroenv/lib/python27.zip', '/home/omero/omeroenv/lib/python2.7', '/home/omero/omeroenv/lib/python2.7/plat-linux2', '/home/omero/omeroenv/lib/python2.7/lib-tk', '/home/omero/omeroenv/lib/python2.7/lib-old', '/home/omero/omeroenv/lib/python2.7/lib-dynload', '/global/software/sl-6.x86_64/modules/langs/python/2.7.11/lib/python2.7', '/global/software/sl-6.x86_64/modules/langs/python/2.7.11/lib/python2.7/plat-linux2', '/global/software/sl-6.x86_64/modules/langs/python/2.7.11/lib/python2.7/lib-tk', '/home/omero/omeroenv/lib/python2.7/site-packages', '/home/omero/OMERO.server/lib/fallback']


What are we missing?  Can this be worked around?

thanks,
-k
--
Karen M. Fernsler <kmfernsler at lbl.gov> PH:1.510.486.4815
High Performance Computing Services (HPCS)
University of California
Lawrence Berkeley National Laboratory
One Cyclotron Road, Berkeley, CA 94720


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