[ome-users] omero admin start fails

[Aleksandra Tarkowska (Staff)]

Hi Sara,

Could you send all logs from /usr/local/Cellar/omero52/5.2.4/var/log ?
Looks like there are many errors there.

Ola
Software Engineer
Open Microscopy Environment
University of Dundee

On 21 Jun 2016, at 19:56, Sara J Nagreen <nagreen at math.wisc.edu<mailto:nagreen at math.wisc.edu>> wrote:

I’ve been trying to resurrect a Omero server program.  We upgraded the machine in question from OS X.9 to OS X.11.

In the process we ended up with a bunch of non-functional programs, and messed up permissions.  We also installed Mac OS X Server at the same time, which probably added to the mess.

We got homebrew back working and postgres, but in the process, decided to just upgrade, and we lost our config.xml.

So, when we do a
omero admin start

it fails.

gilroylabmac:bin gilroylab$ omero admin start
Creating /usr/local/Cellar/omero52/5.2.4/var/master
Creating /usr/local/Cellar/omero52/5.2.4/var/registry
No descriptor given. Using etc/grid/default.xml
Waiting on startup. Use CTRL-C to exit
.............................
Failed to startup some components after 300 seconds
Calling "stop" on remaining components
Waiting on shutdown. Use CTRL-C to exit


Per your instructions, here’s the output of omero_admin_diagnostics.

<omero_admin_diag.txt>

I’m pretty sure I just need to reset some configs for the config.xml file, but am not sure which ones.

I’m pulling my hair out here, for the last 3 days.   Any ideas?

Sara Nagreen
Botany/Math IT Coordinator
University of Wisconsin

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