[ome-users] download datasets and projects

[Munro, Ian]

Hi Marcela

In case this is simpler for you, please note that you can also download multiple images from a dataset via the web app as follows:
Select multiple images by clicking while holding the shift key, then press the “download” button at top-right.

Best Wishes


Ian


On 6 Jun 2016, at 11:19, Simon Li <spli at dundee.ac.uk<mailto:spli at dundee.ac.uk>> wrote:

Hi Marcela

Sorry for the delay in replying, we've all been busy with our annual OME users meeting.

OMERO comes with a "Batch Image Export" script which allows you to download multiple images at once as jpeg, png or tiff through Insight or Web. If this isn't sufficient and you want to download the files in their original format I've got a script you can try:
https://gist.github.com/manics/5720713

See this previous thread for details:
http://lists.openmicroscopy.org.uk/pipermail/ome-users/2014-June/004501.html

Simon



On 31 May 2016 at 15:37, Marcela Díaz <marcela at pasteur.edu.uy<mailto:marcela at pasteur.edu.uy>> wrote:
Hi, my name is Marcela.
In the Institut we start to use omero for microscopy images management but I find a big problem with the download of datasets or projects. Omero do not allow you to download the entire dataset or project, you have to download image per image... If you have a project with datasets inside is so laborious and time loss to download image per image en each dataset of a project. There is any solution to this problem?

Thanks in advance,

MSc. Marcela Díaz

Institut Pasteur de Montevideo

tel +598 2522 0910 int. 188<tel:%2B598%202522%200910%20int.%20188>

The University of Dundee is a registered Scottish Charity, No: SC015096

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The University of Dundee is a registered Scottish Charity, No: SC015096
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