[ome-users] Removing previous incidence of ICE
Simon Li
spli at dundee.ac.uk
Tue Apr 26 10:00:53 BST 2016
Hi Shaun
Thanks for letting us know! Did you just uninstall zeroc-ice?
(/home/omero/venv/bin/pip uninstall zeroc-ice)
Cheers, Simon
On 26 April 2016 at 09:59, Shaun Hare <Shaun.Hare at nottingham.ac.uk<mailto:Shaun.Hare at nottingham.ac.uk>> wrote:
Perfect problem solved
Thanks again community
From: ome-users <ome-users-bounces at lists.openmicroscopy.org.uk<mailto:ome-users-bounces at lists.openmicroscopy.org.uk>> on behalf of Shaun Hare <Shaun.Hare at nottingham.ac.uk<mailto:Shaun.Hare at nottingham.ac.uk>>
Reply-To: OME User Support List <ome-users at lists.openmicroscopy.org.uk<mailto:ome-users at lists.openmicroscopy.org.uk>>
Date: Tuesday, 26 April 2016 at 09:55
To: OME User Support List <ome-users at lists.openmicroscopy.org.uk<mailto:ome-users at lists.openmicroscopy.org.uk>>
Subject: Re: [ome-users] Removing previous incidence of ICE
Thanks Simon
I think I see the issue – at the bottom of pip freeze right?
Rpm –qa ice\*
ice-libs-3.5.1-1.el7.x86_64
ice-3.5.1-1.el7.noarch
ice-python-3.5.1-1.el7.x86_64
backports.ssl-match-hostname==3.4.0.2
chardet==2.2.1
configobj==4.7.2
decorator==3.4.0
Django==1.8.12
ethtool==0.8
fail2ban==0.9.3
fros==1.0
gunicorn==19.4.5
iniparse==0.4
iotop==0.6
IPy==0.75
jabber.py==0.3.post1
javapackages==1.0.0
kitchen==1.1.1
lxml==3.2.1
M2Crypto==0.21.1
matplotlib==1.2.0
nose==1.3.0
numexpr==2.3
numpy==1.7.1
pbr==1.9.1
pciutils==1.7.3
perf==0.1
Pillow==2.9.0
policycoreutils-default-encoding==0.1
pycurl==7.19.0
pygobject==3.14.0
pygpgme==0.3
pyliblzma==0.5.3
pyOpenSSL==0.13.1
pyparsing==1.5.6
python-dateutil==1.5
python-dmidecode==3.10.13
pytz===2012d
pyudev==0.15
pyxattr==0.5.1
rhnlib==2.5.75
scipy==0.12.1
seobject==0.1
sepolicy==1.1
setroubleshoot==1.1
six==1.9.0
slip==0.4.0
slip.dbus==0.4.0
stevedore==1.12.0
tables==3.2.0rc3
urlgrabber==3.10
virtualenv==15.0.1
virtualenv-clone==0.2.6
virtualenvwrapper==4.7.1
yum-metadata-parser==1.1.4
zeroc-ice==3.6.2
From: ome-users <ome-users-bounces at lists.openmicroscopy.org.uk<mailto:ome-users-bounces at lists.openmicroscopy.org.uk>> on behalf of Simon Li <spli at dundee.ac.uk<mailto:spli at dundee.ac.uk>>
Reply-To: OME User Support List <ome-users at lists.openmicroscopy.org.uk<mailto:ome-users at lists.openmicroscopy.org.uk>>
Date: Tuesday, 26 April 2016 at 09:49
To: OME User Support List <ome-users at lists.openmicroscopy.org.uk<mailto:ome-users at lists.openmicroscopy.org.uk>>
Subject: Re: [ome-users] Removing previous incidence of ICE
Hi Shaun
Could you outline the steps you took to remove Ice 3.6, and to install 3.5? Could you also tell us how you setup your virtualenv (/home/omero/venv)? Is it possible you've still got the Ice 3.6 python module in there?
Could you paste the output of:
rpm -qa ice\*
/home/omero/venv/bin/pip freeze
Best wishes
Simon
On 26 April 2016 at 08:21, Shaun Hare <Shaun.Hare at nottingham.ac.uk<mailto:Shaun.Hare at nottingham.ac.uk>> wrote:
Sorry for bombarding the list – but at the University of Nottingham we are running through a new install
We have had ICE 3.6 installed however that has now been removed
But when I try to start OMERO it still thinks it is there
(venv)[omero at lslapome01 ~]$ OMERO.server/bin/omero
Traceback (most recent call last):
File "OMERO.server/bin/omero", line 97, in <module>
import omero.cli
File "/home/omero/OMERO.server/lib/python/omero/__init__.py", line 43, in <module>
raise Exception(msg)
Exception:
ERROR: Ice version mismatch!
Your OMERO code has been compiled using Ice version 3.5.1
but you seem to have Ice version 3.6.2 installed. If you need
help understanding this issue, please send this error message
to the OME community:
http://www.openmicroscopy.org/site/community
Debugging Info:
--------------
VERSION=5.2.2-ice35-b17
PYTHONPATH=/home/omero/OMERO.server/lib/python:/home/omero/OMERO.server/var/lib:/home/omero/OMERO.server-5.2.2-ice35-b17/bin:/home/omero/venv/lib64/python27.zip:/home/omero/venv/lib64/python2.7:/home/omero/venv/lib64/python2.7/plat-linux2:/home/omero/venv/lib64/python2.7/lib-tk:/home/omero/venv/lib64/python2.7/lib-old:/home/omero/venv/lib64/python2.7/lib-dynload:/usr/lib64/python2.7:/usr/lib/python2.7:/home/omero/venv/lib/python2.7/site-packages:/usr/lib64/python2.7/site-packages:/usr/lib64/python2.7/site-packages/Ice:/usr/lib64/python2.7/site-packages/gtk-2.0:/usr/lib/python2.7/site-packages:/home/omero/OMERO.server/lib/fallback
(venv)[omero at lslapome01 ~]$ yum list ice
Loaded plugins: fastestmirror
Loading mirror speeds from cached hostfile
* epel: www.mirrorservice.org<http://www.mirrorservice.org>
Installed Packages
ice.noarch 3.5.1-1.el7 @zeroc.com_download_Ice_3.5_el7_x86_6
Any thoughts on how to proceed would be appreciated – to get OMERO to recognise the 3.5 install
Shaun
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Please do not use, copy or disclose the information contained in this
message or in any attachment. Any views or opinions expressed by the
author of this email do not necessarily reflect the views of the
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This message has been checked for viruses but the contents of an
attachment may still contain software viruses which could damage your
computer system, you are advised to perform your own checks. Email
communications with the University of Nottingham may be monitored as
permitted by UK legislation.
This message and any attachment are intended solely for the addressee
and may contain confidential information. If you have received this
message in error, please send it back to me, and immediately delete it.
Please do not use, copy or disclose the information contained in this
message or in any attachment. Any views or opinions expressed by the
author of this email do not necessarily reflect the views of the
University of Nottingham.
This message has been checked for viruses but the contents of an
attachment may still contain software viruses which could damage your
computer system, you are advised to perform your own checks. Email
communications with the University of Nottingham may be monitored as
permitted by UK legislation.
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