[ome-users] virtual image dosen't index the planes right

[MEYENHOFER Felix]

Hi David

the problem was actually not the opening but rather exporting it afterwards. So the resulting ome.tif stack had all the same planes. Sorry I wasn’t clear on that in the initial report. However I can’t reproduce it anymore either. I discovered the problem when doing a deconvolution on such a stack that I manually converted from ndpi to ome.tif a couple of weeks ago. But since then I updated Bio-Formats and in one of the recent releases there was a fix for some indexing problem. 
I guess we just forget I ever wrote this bug report.

Best, 

Felix

> On 30 Oct 2015, at 14:19 , David Gault (Staff) <d.gault at dundee.ac.uk> wrote:
> 
> Hi Felix,
> 
> I have tested the issue with the sample file provided and have been unable to reproduce the issue.
> For the largest image series it does take a short while to load the new image and so may appear as if the image hasn’t updated if you scroll through them quickly.
> 
> Can you check to see if you still see the same issue with the other image series in the file?
> 
> With Thanks,
> David Gault
> 
> 
>> On 28 Oct 2015, at 21:15, MEYENHOFER Felix <felix.meyenhofer at unifr.ch> wrote:
>> 
>> Hello
>> 
>> small bug report
>> 
>> when opening the following file (ndpi), the planes of the stack turn out to be all the same. That is if the “virtual stack” option is selected.
>> https://drive.switch.ch/public.php?service=files&t=f006627509d481a9af386e1b90efb1eb
>> 
>> Best,
>> 
>> Felix
>> 
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> 
> 
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