[ome-users] Having trouble opening .nd2 file in Bio-formats cppwrap

Joe Ping-Lin Hsiao phsiao at cs.unc.edu
Thu Aug 13 20:21:24 BST 2015


Hi,

I am using Bio-formats 5.1.2, and I have trouble opening a .nd2 file from
my program and from "showinf". The .nd2 file has been uploaded. The weird
thing is Fiji can open the file fine. The error message I got was:

11:35:54.179 [main] DEBUG loci.common.NIOByteBufferProvider - Using mapped
byte buffer? false
loci.formats.UnknownFormatException: Unknown file format:
/common1/phsiao/build/vst/sample_vid/samplet01xy1.nd2
    at loci.formats.ImageReader.getReader(ImageReader.java:190)
    at loci.formats.ImageReader.setId(ImageReader.java:832)
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