[ome-users] OMERO 5 install

Mark Woodbridge m.woodbridge at imperial.ac.uk
Tue Apr 29 11:30:37 BST 2014


Brilliant. Thanks! Everything looks ok now. The database exception only 
seems to have reported the first time I started the server so I'm not 
worried about that. We're using PostgreSQL 8.4.12 (which is almost EOL 
anyway).

Mark.

On 29/04/14 11:18, Josh Moore wrote:
>
> On Apr 28, 2014, at 12:39 PM, Mark Woodbridge wrote:
>
>> Hi,
>
> Hi Mark,
>
>
>> I've just setup a fresh OMERO 5.0.1 installation on RHEL6. It all appears
>> to be working fine but there are a couple of errors/warnings in the logs.
>> I just wondered if these are something to worry about? The
>> libIceStormService.so.33 error suggests something is hard-coded to use Ice
>> 3.3 even though I'm using the ice35 version of OMERO and the 3.5 ZeroC RPMs.
>
> Did you copy the etc/grid/* files over? If so, you'll need to replace
> any references to 3.3 with 3.5.
>
>> PixelData-0.log:
>>
>> 	2014-04-28 11:20:31,855 WARN  [ ome.services.util.ServiceHandler] (2-thread-4) DataIntegrityViolationException thrown.
>> 	org.springframework.dao.DuplicateKeyException: PreparedStatementCallback; SQL [insert into configuration (name, value) values (?,?)]; ERROR: duplicate key value violates unique constraint "configuration_pkey"; nested exception is org.postgresql.util.PSQLException: ERROR: duplicate key value violates unique constraint "configuration_pkey"
>
> This is a known-issue (http://trac.openmicroscopy.org.uk/ome/ticket/10181) that arises infrequently. What version of PostgreSQL are you using?
>
> To workaround, can you try: bin/omero admin ice server stop PixelData-0
>
> Cheers,
> ~Josh.
>



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