[ome-users] Building openmicroscopy from source

Josh Moore josh at glencoesoftware.com
Tue Apr 8 20:10:25 BST 2014


On Apr 8, 2014, at 6:24 PM, John Webber (NBI) wrote:

> Hi,

Hi John,


> I'm seeing a strange error when trying to build openmicroscopy from source on Windows:
> 
>                ::::::::::::::::::::::::::::::::::::::::::::::
> 
>                ::          UNRESOLVED DEPENDENCIES         ::
> 
>                ::::::::::::::::::::::::::::::::::::::::::::::
> 
>                :: ome#bio-formats;UNKNOWN: not found
> 
>                ::::::::::::::::::::::::::::::::::::::::::::::
> 
> 
> 
> :: USE VERBOSE OR DEBUG MESSAGE LEVEL FOR MORE DETAILS
> 
> BUILD FAILED
> D:\GitHub\openmicroscopy_v5.0\build.xml:265: The following error occurred while
> executing this line:
> D:\GitHub\openmicroscopy_v5.0\components\antlib\resources\global.xml:434: The fo
> llowing error occurred while executing this line:
> D:\GitHub\openmicroscopy_v5.0\components\antlib\resources\lifecycle.xml:62: impo
> ssible to resolve dependencies:
>        resolve failed - see output for details
> 
> Total time: 52 seconds
> 
> D:\GitHub\openmicroscopy_v5.0>
> 
> I have "git cloned" this version of openmicroscopy from as follows:
> 
>       git clone -branch dev_5_0 https://github.com/openmicroscopy/openmicroscopy.git openmicroscopy
> 
> Following the above, I have also run the following commands:
> 
>       git submodule init
>       git submodule update

Are the two sets of commands (build ... && git ...) run in different shells?


> I then run the following in the following to build openmicroscopy:
> 
> set JAVA_HOME=C:\Program Files\Java\jdk1.7.0_51
> Set ICE_HOME=C:\Program Files (x86)\ZeroC\Ice-3.5.1
> Set OMERO_HOME=D:\GitHub\openmicroscopy_v5.0
> set PATH=C:\Program Files (x86)\ZeroC\Ice-3.5.1\bin\vc100\x64;C:\Program Files\Java\jdk1.7.0_51\bin;C:\Python27;%PATH%

Could you also try adding the `git` exe to your %PATH% at this stage and re-launch?


> set ARCH=x64
> set RELEASE=Os
> python build.py clean
> python build.py
> python build.py build-cpp
> 
> It is the python build.py which is resulting in the "ome#bio-formats;UNKNOWN: not found" error.
> 
> Please can someone point me in the direction of where I am going wrong?
> 
> Thanks
> John

Cheers,
~Josh.


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