[ome-users] building bioformats from source

Jon Rowell jonr at aptia.com
Sat May 11 20:44:20 BST 2013


I am trying to build the latest source for bioformats off of github.  If I do:

ant clean jars tools

I get the following error:

generate-source:
     [exec] WARNING:root:Element <"ExcitationFilterRef" XschemaElement instance at 0x100fe22d8> has duplicate object with same name, skipping!
     [exec] WARNING:root:Element <"EmissionFilterRef" XschemaElement instance at 0x100fe2518> has duplicate object with same name, skipping!
     [exec] Traceback (most recent call last):
     [exec]   File "/foo/Projects/bioformats/components/xsd-fu/xsd-fu", line 585, in <module>
     [exec]     main(opts)
     [exec]   File "/foo/Projects/bioformats/components/xsd-fu/xsd-fu", line 117, in main
     [exec]     template = NewTextTemplate(open(template_path(CLASS_TEMPLATE, opts)).read())
     [exec] NameError: global name 'NewTextTemplate' is not defined

BUILD FAILED
/foo/Projects/bioformats/ant/toplevel.xml:973: The following error occurred while executing this line:
/foo/Projects/bioformats/components/ome-xml/build.xml:26: The following error occurred while executing this line:
/foo/Projects/bioformats/ant/xsd-fu.xml:25: exec returned: 1


Any ideas?

Jon Rowell


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