[ome-users] Problems opening Nikon nd2 files with Bioformats

[Matthew Pearson]

Hi all,

We're having some issues opening multidimensional Nikon nd2 data sets  
in FIJI.  The data is multi xy position, lambda, time lapse.  When i  
try to open the file using hyperstack it opens as a single window.   
Instead of containing the time points, moving the Z scroll bar moves  
between different xy stage positions and through time but not in  
order, so somehow the data is all jumbled.  Its been a while since  
i've used nd2 files in fiji but i thought previously the initial  
window you see when opening files is a thumbnail preview of each xy  
position with a checkbox next to each so you can decide which xy  
positions you open.  What has happened to this?  And are you aware of  
issues opening this file type?

Thanks for the help,

Matt



--
Matt Pearson
Microscopy and Imaging Facility
MRC Human Genetics Unit
IGMM
University of Edinburgh
Crewe Road
Edinburgh
EH4 2XU

Tel: 0131 467 8425






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