[ome-users] Saving as Quicktime fails after latest Fiji update

[Matt Wyczalkowski]

Hi,

After a recent update by Fiji, the Loci Bio-formats Exporter Quicktime
functionality fails.  This has worked well in the past.

I am running Mac OS X 10.6.8.
ImageJ: 1.47i
Java: 1.6.0_37 (64 bit)
Loci Plugins for ImageJ, revision d58fa88, built 31 Jan 2013
Release: 4.5-DEV

"Update Fiji" indicates Fiji is up to date.

Steps to reproduce error:
1) File -> New... -> Image.  400x400 pix, 3 stacks
2) Plugins -> LOCI -> BioFormats Exporter.
3) Save as: foo.mov, Quicktime Format.
4) None of the "Write each..." boxes checked.

I get the following exception:

java.lang.reflect.InvocationTargetException
    at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
    at
sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39)
    at
sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
    at java.lang.reflect.Method.invoke(Method.java:597)
    at ij.Command.runPlugIn(Command.java:148)
    at ij.Command.runCommand(Command.java:97)
    at ij.Executer.run(Executer.java:64)
    at java.lang.Thread.run(Thread.java:680)
Caused by: java.lang.IllegalArgumentException: Invalid Z size: 0
    at loci.formats.FormatTools.getZCTCoords(FormatTools.java:403)
    at loci.plugins.out.Exporter.run(Exporter.java:545)
    at loci.plugins.LociExporter.run(LociExporter.java:77)
    at
ij.plugin.filter.PlugInFilterRunner.processOneImage(PlugInFilterRunner.java:262)
    at
ij.plugin.filter.PlugInFilterRunner.<init>(PlugInFilterRunner.java:111)
    at ij.IJ.runUserPlugIn(IJ.java:187)
    at ij.IJ.runPlugIn(IJ.java:152)
    ... 8 more

Any help would be appreciated.

Regards,

Matt

---
Matthew A. Wyczalkowski, Ph.D.
NIH NRSA Postdoctoral Fellow
Taber Lab, Department of Biomedical Engineering
Washington University in St. Louis
http://taberlab.seas.wustl.edu
wyczalkowskim at wustl.edu
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